Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 414 a.a., multidrug transporter subunit MdtA from Klebsiella michiganensis M5al

 Score =  130 bits (327), Expect = 7e-35
 Identities = 108/375 (28%), Positives = 169/375 (45%), Gaps = 42/375 (11%)

Query: 56  FTAPKPPITVAAAMAEQRPWQERLPAVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAG 115
           F A   P+  A A +E  P    L  +G++ A   V +   V+G + ++HF  GQQVKAG
Sbjct: 52  FGAALAPVQAATAASEAVP--RYLSGLGTVTAANTVTVRSRVDGQLLAIHFTEGQQVKAG 109

Query: 116 QLLLQLNDDQETALLGTA-------LADLGLAKVDFGRGSQLVGDSAISRGEFDRLSS-- 166
            LL +++  Q    L  A        A L  A+ D  R  QLV  + +SR E D   S  
Sbjct: 110 DLLAEIDPSQFKVALAQAEGQLAKDRATLANARRDLARYQQLVKTNLVSRQELDTQQSLV 169

Query: 167 -----QYRRNQAVVEQLKAQKIKKRINAPFSGTIGIRQVDIGQYLAAG--TVIATLQDTS 219
                  + ++A V   + Q    RI AP  G +G++QVDIG  +++G  T I  L  T 
Sbjct: 170 SETQGTIKADEAAVASAQLQLNWSRITAPIDGRVGLKQVDIGNQISSGDTTGIVVLTQTH 229

Query: 220 SLYVDFNVPEQALPHLSLGQQVLVQVAAYPGQR------FPGSLSAINPKVEETTRNLLV 273
            + V F +PE  +  +   Q+   ++      R        GSL +++ +++ TT  + +
Sbjct: 230 PIDVVFTLPENQIATVVQAQKAGKKLVVEAWDRTNKQKISEGSLLSLDNQIDATTGTIKL 289

Query: 274 RATMANPDGKLLPGMFASLLILLPNPQPQVVVPESAITYTLYGNSVYVASPRKDKDGKPV 333
           +A   N D  L P  F +  +L+   Q  VV+P +A+     G+ V+V +          
Sbjct: 290 KARFTNLDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNDENK------ 343

Query: 334 YDDKGQPQLVAEQRTVKTGERRDGVVVVSEGLQAGEQVVTAGQLKLTPGAAIRI--GQDN 391
                       + TV  G +    VV++ GL AG++VVT G  +LT GA + +   Q+ 
Sbjct: 344 ----------VSKHTVTPGIQDSLKVVINAGLSAGDRVVTDGIDRLTEGAKVEVVEAQNA 393

Query: 392 ALKPEPGAAAKDSGG 406
           A   EP  A     G
Sbjct: 394 ASAAEPAKATSREYG 408