Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 320 a.a., RND transporter from Burkholderia phytofirmans PsJN

 Score =  125 bits (314), Expect = 2e-33
 Identities = 99/331 (29%), Positives = 156/331 (47%), Gaps = 37/331 (11%)

Query: 71  EQRPWQERLPAVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDDQETALL 130
           + R  +E+L   G++     V L   V+G++K + F  G  VK GQLL ++  D   A L
Sbjct: 4   QPREVREQLDLSGTVAPSATVTLVARVQGVLKEIGFSDGANVKQGQLLFRIEPDTYRAQL 63

Query: 131 GTALADLGLAKVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIKKRIN-- 188
               A+L  A+ +  R  QL  D+A S        S  ++ Q   +Q  A++   RIN  
Sbjct: 64  TYDQAELVNAEQELTRQKQLTADNATS-------ESSLQKAQTTRDQALAKRDMSRINLG 116

Query: 189 -----APFSGTIGIRQVDIGQYLAA--GTVIATLQDTSSLYVDFNVPEQALPHLSL---- 237
                APFSG IG R  D+G  + A   T +ATL     +YV+F + E+    + L    
Sbjct: 117 YTEIRAPFSGRIGARSFDVGNLVGASDSTKLATLDRIQPVYVNFTLNERDANRIGLFTKP 176

Query: 238 GQQVLVQVAAYP-GQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILL 296
            + V V V   P G+    +L  ++ +V+ ++  + +RA +AN D  L+PGM   + I  
Sbjct: 177 PRTVRVNVLGAPAGKGEDAALEFVDTRVDSSSGAIRLRADIANKDAHLIPGMSVEVHIPA 236

Query: 297 PNPQPQVVVPESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRD 356
             PQ  ++VP++A+     G  V V +                   V E+R V TG    
Sbjct: 237 GAPQNVLLVPDTALLREQAGAFVLVVNSAS----------------VIEKRAVVTGGLFG 280

Query: 357 GVVVVSEGLQAGEQVVTAGQLKLTPGAAIRI 387
            +  ++ GL AG+QVVT G L + PG  +++
Sbjct: 281 SLRAITSGLNAGDQVVTGGALAVAPGTKVQV 311