Pairwise Alignments

Query, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1044 a.a., Cation/multidrug efflux pump from Sinorhizobium meliloti 1021

 Score =  526 bits (1354), Expect = e-153
 Identities = 331/1022 (32%), Positives = 559/1022 (54%), Gaps = 30/1022 (2%)

Query: 7    FIQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQGYITQP 66
            FI RP LA+V+++++ + G  A  ++ I Q+PQ+    + VT +YPGANA  ++  +  P
Sbjct: 7    FIDRPRLATVIAVVMAIAGALALFQIPIAQFPQITPPEVQVTASYPGANASVLEESVGAP 66

Query: 67   LQQSLASAEGIDYMTSVSRQN--FSIISIYARIGADSDRLFTELLAKANEVRNKLPQDSE 124
            ++  +   E + YM+S S  N  +S+   +A +G D       +  +      +LP    
Sbjct: 67   IEDQVNGVEDMLYMSSSSTNNGTYSLTVTFA-VGTDPALAQVNVQNRVALATPRLPASVT 125

Query: 125  DPVLSKEAADASALMYVSFYSKEMSNPQI--TDYLSRVIQPKLATLPGMAEAEILGNQVF 182
               +S  A  +S LM V+ YS E +  +I  ++Y +  I+  +A + G+ EA I G   +
Sbjct: 126  QTGVSVRARSSSMLMGVAIYSPEGTRDEIFISNYAANNIRDAIARVAGVGEAGIFGPS-Y 184

Query: 183  AMRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGEV------KGEYVVTSVNASTELKS 236
            +MR+W++P ++   GL+ATD+T+A++  N  ++AG++       G+ +  ++ A   L +
Sbjct: 185  SMRIWMNPDRMQALGLTATDLTSAIQAQNAQASAGQLGSPPATSGQQLQLTIMAQGRLAT 244

Query: 237  AEAFAALPLKTSGDSRVL-LGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDV 295
             E F+ + ++T+ +  ++ L DVARVE+GA++YDT S+F+G PS  + +  +  AN L V
Sbjct: 245  EEDFSNIIVRTNTEGALVRLRDVARVELGAQSYDTASTFNGQPSATVVVYQSAEANALAV 304

Query: 296  IKEVRRIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGAL 355
             + V   +  L  Q P  +  +I +D T FI  +I E+  TL     +V+ V + FL   
Sbjct: 305  SRAVLSELDRLSRQFPEDVAYAIVFDTTAFITETIKEIAITLAITFALVVAVTYFFLQDW 364

Query: 356  RSVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHM-E 414
            R+ +IP +TIP+S+IG    + ++ YS N +TL A++LAI LVVDDAI+VVEN+ R M E
Sbjct: 365  RATVIPTLTIPVSLIGGFAVLYLLDYSANTITLFAVILAISLVVDDAIIVVENVKRLMAE 424

Query: 415  EGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISG 474
            E  +  DA      ++  P+V+ T+ LAA++ PI F+ G+TG L+++F++T+   +  S 
Sbjct: 425  ERLNVHDATRRTMSQVTGPIVATTLVLAALFVPIAFVAGITGQLYRQFSVTILITITFST 484

Query: 475  IVALTLSPMMCALLLR--REQNPSGLAHRLDQLFERLKGRYQRLLHATLDSRPVVLVFAV 532
            I ALTLSP +C L+LR  REQ  SG+    ++  +  +  Y  +L        +  V  +
Sbjct: 485  INALTLSPALCVLMLRSPREQR-SGIFGTFNRGLDFSRNWYVAMLDRMSRRLWIASVILL 543

Query: 533  IILCLIPVLLKFTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQFTPLFKAFPEYYS 592
             IL  +  L +       P+EDQG +F+    P  A+L+      D  + + +  P   +
Sbjct: 544  AILGGVYGLFRALPTGFVPSEDQGYLFINVQLPNAASLERTQQALDTVSRILQRTPGVAN 603

Query: 593  SFQINGFN-----GVQTGIGGFLLKPWNER---ERTQMELLPLVQAKLEEISGLQIFGFN 644
            S  I G +     G   G+    LKPW ER   E +   ++  ++A    I    +  FN
Sbjct: 604  SVGIAGNSMVGGGGSNAGMVITALKPWGERRSAEESIDAIMNRLRADFGRIPTASVVPFN 663

Query: 645  LPSLPGTGE--GLPFQFVINTAGDYPALLDVAQRIKTRAQESGKFAFLDIDLAFDKPEVV 702
             P++PG G   G   +    +      + +V + +  +A ++   A +    + D P+V 
Sbjct: 664  PPAIPGLGTTGGFDLRLQARSGQSQQEIAEVMRGLIVKANQTPGLASVFSTFSADVPQVF 723

Query: 703  VDIDRAKAAQMGVSMDTLGGTLATLLGEAEINRFTLEGRSYKVIAQVERPYRDNPGWLNN 762
            +++DR +A   GVS  T+   + + LG + ++ F +  R Y+V  Q E  +R     +  
Sbjct: 724  LNVDRRRAELFGVSTATIFNAMQSHLGSSYVDDFNIFSRVYQVRIQDEPQFRSRIEDIQR 783

Query: 763  YYVKNDQGQLLPLSTLITLTDRARPRQLNQFQQLNAAIIQG--VPMVSLGEALKTVQDIA 820
              V++  G+L+PL +L++++    P  +N++    +A I G      S G+AL T+  +A
Sbjct: 784  LRVRSRNGELVPLQSLLSISTSYGPTAINRYNLFPSASINGQAATGTSTGQALATMASLA 843

Query: 821  REEAPEGFAFDYAGAARQYVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILVTVPL 880
             +  PEGF F++ G A Q  Q G+   +   + L   +L L  Q+ES+  PL ++++V +
Sbjct: 844  EQNLPEGFGFEWTGLALQEEQAGNQTALILLMGLIFTYLFLVGQYESWSVPLAVMLSVAV 903

Query: 881  SICGALLPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRDERGLSVREAIEEA 940
            ++ GAL+ L L    +NIY Q+GLV LIGL +K+ ILIVEFA + RD +G++  EA    
Sbjct: 904  AVLGALVGLMLASIDINIYAQIGLVLLIGLAAKNAILIVEFAKERRD-KGMATPEAAAAG 962

Query: 941  AAIRLRPVLMTTAAMVFGMVPLILASGAGAVSRFDIGMVIATGMSIGTLFTLFVLPCIYT 1000
             A R RPVLMT  A + G++PL++A+GAGA SR  IGM +  G+ +GT+  L ++P  Y 
Sbjct: 963  TAQRFRPVLMTAMASILGVIPLVIATGAGAGSRRAIGMTVFGGLLVGTVVGLLLIPVFYV 1022

Query: 1001 LL 1002
            L+
Sbjct: 1023 LV 1024