Pairwise Alignments

Query, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1044 a.a., hydrophobe/amphiphile efflux-1 (HAE1) family transporter from Dechlorosoma suillum PS

 Score =  592 bits (1526), Expect = e-173
 Identities = 358/1018 (35%), Positives = 565/1018 (55%), Gaps = 22/1018 (2%)

Query: 7    FIQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQGYITQP 66
            FI RP+ ASV+S++I++ G  A   L I QYP++    + ++ +YPGA+AET+   +  P
Sbjct: 5    FINRPIFASVISIVIVIAGIMASRVLPISQYPEIAPPTVIISASYPGASAETLAKTVAAP 64

Query: 67   LQQSLASAEGIDYMTSVSRQNFSI-ISIYARIGADSDRLFTELLAKANEVRNKLPQDSED 125
            +++ L+  E + Y  S +  N S+ I+    +G D D     +  +      +LP     
Sbjct: 65   IEEQLSGVENLMYFNSTASANGSLSITATFEVGTDVDMATVNVNNRVKIAEPRLPDVVRQ 124

Query: 126  PVLSKEAADASALMYVSFYSKEMSNPQI--TDYLSRVIQPKLATLPGMAEAEILGNQVFA 183
              ++ +      LM  +  S E +   +  ++Y    I   L  +PG+ +A+I G   ++
Sbjct: 125  YGVTVQKRSNDILMVAAITSPEGTRTPLYLSNYALVNILDDLKRIPGVGDAQIFGALDYS 184

Query: 184  MRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGEV------KGEYVVTSVNASTELKSA 237
            MRLWL P ++A  G++ T+++NA+   N  +AAG++       G+ +V +V A   L + 
Sbjct: 185  MRLWLRPDRMAQLGVTTTEISNAIAAQNKQNAAGKIGQEPAPNGQQLVYTVTAKGRLTTP 244

Query: 238  EAFAALPLKTSGDSRVL-LGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVI 296
            E F  + ++  G    L L DVARVE+GA+NYD  ++  G P V +GI     AN LDV 
Sbjct: 245  EQFGNIVIRADGPKGALYLKDVARVELGAQNYDASTALMGKPVVGVGIFLQSGANALDVA 304

Query: 297  KEVRRIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALR 356
            K+V+  M EL+ + PS ++  + +D T+F+QASI EV+ TL EA+++V +VVF+FL   R
Sbjct: 305  KKVKLRMDELKQKFPSDVDYVVPFDTTKFVQASITEVVHTLVEALVLVAIVVFVFLQNWR 364

Query: 357  SVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHM-EE 415
            + +IP+V +P+S+IG    + + G+S+N LTL AMVLAIG+VVDDAIVV+EN+ R M EE
Sbjct: 365  ATVIPLVAVPVSLIGTFAGLWLFGFSINTLTLFAMVLAIGIVVDDAIVVLENVERLMWEE 424

Query: 416  GKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGI 475
              +P +AA+E  RE++  VV++ + L AV+ P+ FL G+ G L+K+FA+T+A +V +SGI
Sbjct: 425  KMAPKEAAIEAMREVSSAVVAIVLVLCAVFIPVAFLGGIAGMLYKQFAVTVAISVTLSGI 484

Query: 476  VALTLSPMMCALLLRREQNPSGLAHRLDQLFERLKGRYQRLLHATLDSRPVVLVFAVIIL 535
            VALTL+P +CALLL+ +     +    ++LFER    Y   ++ TL  R +  V  V+IL
Sbjct: 485  VALTLTPALCALLLQPKHEEPAIFRPFNRLFERFTKSYTDTVNKTLHHRIIGTVACVVIL 544

Query: 536  CLIPVLLKFTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQFTPLFKAFPEYYSSFQ 595
                 + +       P EDQG +      P  A+L    A  DQF  + K        F 
Sbjct: 545  GGSFFMFRAVPGGFVPAEDQGYLISALMLPDGASLQRTRATGDQFQSMIKQDEAVDRVFV 604

Query: 596  INGFN----GVQTGIGGFL--LKPWNERERTQMELLPLVQAKLEEISGLQIFGFNLPSLP 649
            I G +    G++   G     LK W+ER+    +L          +       FN P++ 
Sbjct: 605  IAGNDIIGGGMKPNAGTVFIPLKDWDERKAGADDLAKKFMGMGMMLPDGLGLVFNPPAIR 664

Query: 650  GTGEGLPFQFVINTAGDY--PALLDVAQRIKTRAQESGKFAFLDIDLAFDKPEVVVDIDR 707
            G G    F+  I   GD     L  V Q+     ++  +   ++       P++ V+++ 
Sbjct: 665  GLGNAGGFEAYIQARGDADPQKLSGVVQQFMEGLKKRQELVGINTFFRPTSPQLSVEVNE 724

Query: 708  AKAAQMGVSMDTLGGTLATLLGEAEINRFTLEGRSYKVIAQVERPYRDNPGWLNNYYVKN 767
            AKA  MG+++  +  TL   +G   +N F L GR+Y+V  Q +  +R  P  L   YVK+
Sbjct: 725  AKAISMGIAVSDVYQTLQATMGTLYVNDFNLNGRTYRVQLQADGQFRSKPEDLGRVYVKS 784

Query: 768  DQGQLLPLSTLITLTDRARPRQLNQFQQLNAAIIQG--VPMVSLGEALKTVQDIAREEAP 825
              G ++P+S LI +     P QL +F    +A + G  VP VS G+A+K V+++A+E  P
Sbjct: 785  SSGSMVPVSALIKVKSVVGPEQLERFNGFLSAKVMGSSVPKVSTGDAIKIVEEVAKETLP 844

Query: 826  EGFAFDYAGAARQYVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILVTVPLSICGA 885
             G+  ++ G A Q  + G+   V FG  + ++FL+LAAQ+E +  PL +++ VP ++ GA
Sbjct: 845  AGYELEWTGQAFQEKRTGTTSAVAFGFGIIMVFLILAAQYEKWSLPLAVILAVPFALFGA 904

Query: 886  LLPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRDERGLSVREAIEEAAAIRL 945
            L  + +     +IY Q+GLV LIGL +K+ ILIVEFA Q R E GL V EA  E A +R 
Sbjct: 905  LAAVMIRGMPNDIYFQIGLVVLIGLAAKNAILIVEFAAQKRAE-GLGVLEAALEGARLRF 963

Query: 946  RPVLMTTAAMVFGMVPLILASGAGAVSRFDIGMVIATGMSIGTLFTLFVLPCIYTLLA 1003
            RP++MT+ A + G+ PL+ A+GAGA +R  +G  +  GM   T      +P  +T L+
Sbjct: 964  RPIVMTSLAFILGVFPLVKATGAGAAARKSMGTGVFGGMLAATFIATIFIPMFFTWLS 1021



 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 14/263 (5%)

Query: 245  LKTSGDSRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVIKEVRRIMP 304
            +K+S  S V +  + +V+      + +  F+G  S  +   + P  +  D IK V  +  
Sbjct: 782  VKSSSGSMVPVSALIKVK-SVVGPEQLERFNGFLSAKVMGSSVPKVSTGDAIKIVEEVAK 840

Query: 305  ELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALRSV----LI 360
            E    LP+   +     A +  +      +     A    I++VFL L A        L 
Sbjct: 841  ET---LPAGYELEWTGQAFQEKRTGTTSAV-----AFGFGIIMVFLILAAQYEKWSLPLA 892

Query: 361  PVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHMEEGKSPF 420
             ++ +P ++ G L  + + G   ++   + +V+ IGL   +AI++VE   +   EG    
Sbjct: 893  VILAVPFALFGALAAVMIRGMPNDIYFQIGLVVLIGLAAKNAILIVEFAAQKRAEGLGVL 952

Query: 421  DAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTL 480
            +AALEGAR    P+V  ++       P+   TG   A  K     + G ++ +  +A   
Sbjct: 953  EAALEGARLRFRPIVMTSLAFILGVFPLVKATGAGAAARKSMGTGVFGGMLAATFIATIF 1012

Query: 481  SPMMCALLLRREQN-PSGLAHRL 502
             PM    L  R  N P G  H +
Sbjct: 1013 IPMFFTWLSGRRANLPEGSYHHV 1035