Pairwise Alignments

Query, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1048 a.a., multidrug efflux RND transporter permease subunit from Klebsiella michiganensis M5al

 Score =  559 bits (1440), Expect = e-163
 Identities = 352/1033 (34%), Positives = 562/1033 (54%), Gaps = 32/1033 (3%)

Query: 7    FIQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQGYITQP 66
            FI RP+ A V++++I+L G  +  KL I QYP +    I++T  YPGA+AET+Q  +TQ 
Sbjct: 5    FIDRPIFAWVIAIIIMLAGGLSILKLPIAQYPTIAPPAISITAMYPGADAETVQNTVTQV 64

Query: 67   LQQSLASAEGIDYMTSVSRQN-FSIISIYARIGADSDRLFTELLAKANEVRNKLPQDSED 125
            ++Q++   + + YM+S       + I++    G D D    ++  K       LPQ+ + 
Sbjct: 65   IEQNMNGIDHLMYMSSNGDSTGTATITLTFESGTDPDIAQVQVQNKLALATPLLPQEVQQ 124

Query: 126  PVLSKEAADASALMYVSFYSKE--MSNPQITDYLSRVIQPKLATLPGMAEAEILGNQVFA 183
              +S E A +S LM V   +    M+   I+DY++  ++  ++   G+ + ++ G+Q +A
Sbjct: 125  QGISVEKASSSFLMVVGVINTNGTMNQDDISDYVAANMKDAISRTSGVGDVQLFGSQ-YA 183

Query: 184  MRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGE------VKGEYVVTSVNASTELKSA 237
            MR+W+DP KL  F L+  DV +A++  N   AAG+      VKG+ +  S+ A T L + 
Sbjct: 184  MRIWMDPNKLNNFQLTPVDVISALKAQNAQVAAGQLGGTPPVKGQQLNASIVAQTRLTNT 243

Query: 238  EAFAALPLKTSGD-SRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVI 296
            E F  + LK + D S+V L DVA++E+G ENYD ++ F+G P+  +GIK    AN LD  
Sbjct: 244  EEFGNILLKVNQDGSQVRLRDVAKIELGGENYDVIAKFNGQPASGLGIKLATGANALDTA 303

Query: 297  KEVRRIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALR 356
              +R  + ++E   PS L +   YD T F+Q SI EV+KTL EA+++V +V++LFL   R
Sbjct: 304  NAIRAELKKMEPFFPSGLKIVYPYDTTPFVQISIHEVVKTLVEAIILVFLVMYLFLQNFR 363

Query: 357  SVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHM-EE 415
            + LIP + +P+ ++G    + + G+S+N LT+  MVLAIGL+VDDAIVVVEN+ R M EE
Sbjct: 364  ATLIPTIAVPVVLLGTFAILALFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEE 423

Query: 416  GKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGI 475
            G  P +A  +   +I   +V + + L+AV+ P+ F  G TGA++++F++T+  A+ +S +
Sbjct: 424  GLPPKEATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMALSVL 483

Query: 476  VALTLSPMMCALLLRREQNPS-----GLAHRLDQLFERLKGRYQRLLHATLDSRPVVLVF 530
            VAL L+P +CA +L+  Q  S     G     +++F++    Y   +   L S    LV 
Sbjct: 484  VALILTPALCATMLKPIQKGSHGATTGFFGWFNRMFDKSTHHYTDSVGNILRSTGRYLVL 543

Query: 531  AVIILCLIPVLLKFTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQFTP--LFKAFP 588
             +II+  +  L     +   P+EDQGV   M+  P  A  +      D+ T   L K   
Sbjct: 544  YLIIVVGMAWLFVRLPSSFLPDEDQGVFLSMAQLPAGATQERTQKVLDEMTDYYLTKEKN 603

Query: 589  EYYSSFQINGF----NGVQTGIGGFLLKPWNER--ERTQMELLP-LVQAKLEEISGLQIF 641
               S F +NGF     G  TGI    LK W++R  E  ++E +         +I    +F
Sbjct: 604  NVESVFAVNGFGFAGRGQNTGIAFVSLKDWSQRPGEENKVEAITGRAMGYFSQIKDAMVF 663

Query: 642  GFNLPSLP--GTGEGLPFQFVINTAGDYPALLDVA-QRIKTRAQESGKFAFLDIDLAFDK 698
             FNLP++   GT  G  FQ +      +  L     Q     AQ     + +  +   D 
Sbjct: 664  AFNLPAIVELGTATGFDFQLIDQAGLGHEKLTQARNQLFGMVAQHPDVLSGVRPNGLEDT 723

Query: 699  PEVVVDIDRAKAAQMGVSMDTLGGTLATLLGEAEINRFTLEGRSYKVIAQVERPYRDNPG 758
            P+  VDID+ KA  +GVS+  +  TL    G + +N F   GR  KV    E  YR  P 
Sbjct: 724  PQFKVDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYIMSEAKYRMLPE 783

Query: 759  WLNNYYVKNDQGQLLPLSTLITLTDRARPRQLNQFQQLNAAII--QGVPMVSLGEALKTV 816
             + N+YV+   GQ++P S   T        +L ++  L +  I  Q  P  S GEA+  +
Sbjct: 784  DIGNWYVRGSDGQMVPFSAFSTSRWEYGSPRLERYNGLPSMEILGQATPGKSTGEAMNLM 843

Query: 817  QDIAREEAPEGFAFDYAGAARQYVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILV 876
            +++A  + P G  +D+ G + Q    G+     + ++L ++FL LAA +ES+  P  +++
Sbjct: 844  EELA-GKLPAGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVML 902

Query: 877  TVPLSICGALLPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRDERGLSVREA 936
             VPL + GALL       + ++Y QVGL+T IGL +K+ ILIVEFA  L D+ G  + EA
Sbjct: 903  VVPLGVVGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEA 962

Query: 937  IEEAAAIRLRPVLMTTAAMVFGMVPLILASGAGAVSRFDIGMVIATGMSIGTLFTLFVLP 996
              EA  +RLRP+LMT+ A + G++PL+++SGAG+ ++  +G  +  GM   T+  +F +P
Sbjct: 963  TLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFFVP 1022

Query: 997  CIYTLLAHKASAK 1009
              + ++  + S K
Sbjct: 1023 VFFVVVRRRFSKK 1035