Pairwise Alignments

Query, 227 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 229 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score =  165 bits (417), Expect = 8e-46
 Identities = 97/227 (42%), Positives = 136/227 (59%), Gaps = 5/227 (2%)

Query: 1   MRILLVEDNRDILANLADYLGMKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGY 60
           MRILLV+D   + A L   L  +GY VD A DG +G  LA  + YDL++LD MLP   G 
Sbjct: 1   MRILLVDDEEALTAPLHRMLRREGYDVDVASDGQTGEQLATHQPYDLLILDWMLPERSGL 60

Query: 61  TLCKRLREDARRDTPVIMLTARDQLDDRLQGFRSGADDYLLKPFALSELAARIEAVLRRA 120
            LC+ +R+  R+  PV+ LTARD +DDR+QG  +GADDYL+KPF L EL AR+ A+LRR+
Sbjct: 61  DLCRSVRQRDRQ-VPVLFLTARDTVDDRVQGLDAGADDYLVKPFELKELLARVRALLRRS 119

Query: 121 ---QGGGRRTLQVADLSYDLDTLEVTRQGRLLKLNPVGLKLLAVLMQKSPHVLRREVLEE 177
              +      L   DL  D       RQGR ++L+    +LLAVLMQ    ++  + L+ 
Sbjct: 120 PRQETSEAPRLAGGDLELDTPNQLAYRQGRRIELSEKETQLLAVLMQHPGQLVSHQELQA 179

Query: 178 ALWGD-DCPDSDSLRSHVHQLRQVIDKPFEKPLLHTVHGVGYRLAEG 223
            +WG  + P S+ L + +  LR+ ++ P E PL+ +V+G GYR   G
Sbjct: 180 QVWGSANPPSSNVLAAQIRLLRRKLEAPGETPLIFSVYGKGYRFQFG 226