Pairwise Alignments

Query, 227 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 233 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

 Score =  155 bits (393), Expect = 5e-43
 Identities = 88/221 (39%), Positives = 129/221 (58%), Gaps = 3/221 (1%)

Query: 3   ILLVEDNRDILANLADYLGMKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGYTL 62
           +L+VED   ++  L   L  +GY V  A DG   + L A +  D+++LD MLP + G  +
Sbjct: 5   VLIVEDEVSLVTLLRYNLEKEGYRVSEAMDGEEAMTLVAEDQPDVVILDWMLPSLSGIEV 64

Query: 63  CKRLREDAR-RDTPVIMLTARDQLDDRLQGFRSGADDYLLKPFALSELAARIEAVLRRAQ 121
           C++LR   R RD P++MLTAR +  DR++G  +GADDY+ KPF++ EL AR++A+LRRAQ
Sbjct: 65  CRQLRRKPRTRDLPILMLTARGEESDRIRGLNTGADDYMSKPFSMPELLARVKALLRRAQ 124

Query: 122 -GGGRRTLQVADLSYDLDTLEVTRQGRLLKLNPVGLKLLAVLMQKSPHVLRREVLEEALW 180
               + TL  +D+  DL    VTR GR + L P   +LL  LMQ    V  RE L  A+W
Sbjct: 125 PTSAKGTLSYSDVVMDLGAHRVTRGGRYIHLGPTEFRLLQFLMQNPGAVFSREELLNAVW 184

Query: 181 GDDC-PDSDSLRSHVHQLRQVIDKPFEKPLLHTVHGVGYRL 220
           G D   +  ++  H+ +LR+ ++      L+ TV   GY L
Sbjct: 185 GPDIYVEPRTVDVHIRRLRKALNGEASTDLIRTVRAAGYAL 225