Pairwise Alignments

Query, 450 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 428 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  171 bits (433), Expect = 4e-47
 Identities = 129/416 (31%), Positives = 210/416 (50%), Gaps = 15/416 (3%)

Query: 37  VQPLSATRQNLWRLTVIRVLVLAAQAGSVGVAYWTELLPLPWLSLAGTLALSSLLCAFTA 96
           V+ L A  Q   ++ ++R L L  Q G    A  T  L L    L     L  L  + T 
Sbjct: 3   VKILGANLQAADQVALLRTLGLLLQIGLTLFAADTFGLSLQMEPLMHVFVLEVLYLSLT- 61

Query: 97  LRLRLSLPVTEMEYALQLACDLLIHSALLYYSGGSTNPFVSYYLVPLAIAAVTLPWLYSL 156
           L LR  L   E    + L+ D L   + LY+SGG+TN F+S  L+P+A+AAVTLP     
Sbjct: 62  LALRKPLFAKERGLFIALSLDTLFWISWLYFSGGATNAFISLLLLPIALAAVTLPIWAPW 121

Query: 157 ILSGIALTAYSLLLVQFYPLEGLPMARDKMQVY-GMWLSIALAAAVITFFAARMAEELRR 215
            L+ I+  AYS+++      +      D    Y GMW +  ++A V+T   A +A+ +RR
Sbjct: 122 SLTAISTLAYSVMIFTVPESQMQHHGMDMSSHYLGMWFNFVISALVLTTSVALIAKRMRR 181

Query: 216 QEQLRSERREESLRDEQLLAVATQAAGAAHELGTPLATMSVLINEMRQDHTDPLLQEDLQ 275
           Q+   +  RE  LR EQL+A+ T +A  AH+L TPL+T+ +L++E+R++  +P +   L 
Sbjct: 182 QDAQLAYMREGQLRQEQLVALGTVSAQMAHQLATPLSTLHLLLDELREETPEPSI--TLV 239

Query: 276 ILQDQVKLCKETLQQLVRAAEANRRLAIVEQDVTAWLDEALNRWHLMRPEASYRFQRLRD 335
            ++  +  C+ TL +L  A E+ R      Q++T  +     +  L+ P+ +  +    +
Sbjct: 240 EMETALGRCEHTLAELRLATESIRDRRQRPQNITELVVGLKQKTQLLMPQTALNWLITCE 299

Query: 336 GKV---PRLAPPPDLTQALLNLLNNAADACPD-------DLEVRLDWDAQDIVISIHDHG 385
            K+    ++     LT A++ L+ NAA A  +       D+ V          + I D+G
Sbjct: 300 PKLLEEKQILTDMSLTPAIMALIENAARASVETIGTSQVDISVDCSPSEGQAYLQIRDYG 359

Query: 386 PGVPPAIAEAIGKPFITTKGKGFGLGLFLSKASVTRAGGSVKLYSHEQGGTLTELR 441
            G+ P++   +G   I +  KG G+ L LS AS+ R G  + L +H QGGT+ ++R
Sbjct: 360 AGIAPSLLPQLGTLLIESP-KGLGVALLLSHASLERLGAELILANHPQGGTVAQIR 414