Pairwise Alignments

Query, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 531 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  495 bits (1274), Expect = e-144
 Identities = 250/526 (47%), Positives = 348/526 (66%), Gaps = 12/526 (2%)

Query: 11  LGAGLLSGAPSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQFERGGTA 70
           + A LLS A  A A   LV C+E SP GFD  QYTT    DA AET+FNRL  F+ G T 
Sbjct: 10  IAAALLSVAVGATAKP-LVVCTEASPEGFDMVQYTTAVTADAVAETIFNRLADFKPGTTE 68

Query: 71  VIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNPFR 130
           VIP LA  W++SDDG TYTFHLR+GVKFHTT+YFKP+R  NADDV+++F R LD ++P+ 
Sbjct: 69  VIPALAESWDISDDGLTYTFHLRKGVKFHTTEYFKPTRDMNADDVVWSFQRQLDPNHPWH 128

Query: 131 KAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYADQ 190
           K     FPYF  MG  + +  VEK+DEHTVKF+L   +A F+ ++AM+F+SI  AEYADQ
Sbjct: 129 KLSSVGFPYFESMGFKELLKSVEKVDEHTVKFSLTRREAPFLADIAMAFSSIYPAEYADQ 188

Query: 191 LLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAITTDASV 250
           LLK  KA D+N KP+GTGPFVF +Y KDAQ+RFK N DY++ +    D L+ AI TD +V
Sbjct: 189 LLKANKAGDLNSKPVGTGPFVFQRYNKDAQVRFKANPDYFRGKP-PADALVLAIATDNNV 247

Query: 251 RMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGSNEANPM 310
           RMQKLK NECQ+ L+P+P DI  +K D NL++ +     + Y A N   K         M
Sbjct: 248 RMQKLKTNECQIALYPKPDDIPSIKKDPNLKVAELDAMTVSYTALNTSHKY--------M 299

Query: 311 AQLKVRQALDMAVDKKKIIESVY-QGAGQLAVNAMPPTQWSYDDSIKDAAFDPEKAKQLL 369
           + ++VR+A+D+A DK+  + +++ +G   +AVN  PPT   ++  +K+   + +KA++LL
Sbjct: 300 SDVRVRKAIDLAFDKEAYVNALFGKGNATVAVNPYPPTLLGFNHDLKNPPRNLDKARELL 359

Query: 370 KEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWGEYIKRSKG 429
           KEAG+ EGT  TL+      P NPN  L A+M+Q+D AK+GIK  I   EWGE +KR+K 
Sbjct: 360 KEAGVPEGTVFTLFTRNGGGPTNPNPMLGAQMMQADLAKVGIKVDIRVMEWGEMLKRAKN 419

Query: 430 GEQGAMLIGWSGDNGDPDNWLGTLYGCDAV-DGNNFSKWCYKPYDDLIKQAKATSDQAKR 488
           GE   +  GW+GDNGDPDN+L  +  C+A  +G N+++WC + +  LI QA+AT +  +R
Sbjct: 420 GEHDMVSAGWAGDNGDPDNFLTPMLSCEAAKNGENYARWCNEKFQALIDQARATVNPEER 479

Query: 489 TELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSF 534
            +LY++AQ +  + +P   +AH+ ++  M   V+ + ISP   N+F
Sbjct: 480 IKLYEQAQVLFNQDLPWISMAHTRMFTAMRNNVEGYVISPLTTNNF 525