Pairwise Alignments

Query, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 531 a.a., periplasmic dipeptide-binding protein from Sinorhizobium meliloti 1021

 Score =  522 bits (1344), Expect = e-152
 Identities = 255/518 (49%), Positives = 358/518 (69%), Gaps = 14/518 (2%)

Query: 25  ASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQFERGGTAVIPGLATKWEVSDD 84
           +   VFCSEGSP GFDPG YT GT FDA+A TV++RL +F++G T   PGLA  W +SDD
Sbjct: 23  SKTFVFCSEGSPEGFDPGLYTAGTTFDAAAHTVYSRLLEFKKGTTETEPGLAESWTISDD 82

Query: 85  GKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNPFRKAYPT--EFPYFTD 142
           G  YTF LR GVKF TT++F P+R  NADDV+F+  R    D+P+   Y T   + YF  
Sbjct: 83  GLEYTFKLRPGVKFQTTEFFTPTRELNADDVIFSIERQWKSDHPWH-GYVTGGSWEYFAG 141

Query: 143 MGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYADQLLKNGKAADINQ 202
           MG+ + +  VEK+D+ TVK  L   +A F+ NLAM FASI S EYAD+L   GK   +NQ
Sbjct: 142 MGLPELLESVEKVDDMTVKIKLKRKEAPFLANLAMPFASIMSKEYADKLQAEGKMNQLNQ 201

Query: 203 KPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAITTDASVRMQKLKKNECQV 262
            P+GTGPF F  YQ+DA IR+K + D+W  +  KID+L+FAITTDA+VR QKL+  EC +
Sbjct: 202 MPLGTGPFAFVGYQQDAVIRYKAHPDFWGGKQ-KIDDLVFAITTDAAVRFQKLQAGECHL 260

Query: 263 TLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGSNEANPMAQLKVRQALDMA 322
             +P  AD+E +KAD NL++ +QAG N+ Y+AYN            P  +++VR+AL+ A
Sbjct: 261 MPYPNAADVEAMKADPNLKVMEQAGLNVAYLAYNTTQP--------PFDKVEVRKALNKA 312

Query: 323 VDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFDPEKAKQLLKEAGIKEGTEITL 382
           ++K+ I+++V+QG    A N +PPT WSY++ I+D  +DPE AK++L++AG+K+   + +
Sbjct: 313 INKQAIVDAVFQGQATPATNPIPPTMWSYNEHIEDDTYDPEAAKKMLEDAGVKD-LSMKV 371

Query: 383 WAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWGEYIKRSKGGEQ-GAMLIGWSG 441
           WAMPV RPY  NA+  AE++Q+D+AK+G+K +IVSYEW EY+++SK  ++ GA+++GW+G
Sbjct: 372 WAMPVARPYMLNARRAAELMQADFAKVGVKVEIVSYEWAEYLEKSKAKDRDGAVILGWTG 431

Query: 442 DNGDPDNWLGTLYGCDAVDGNNFSKWCYKPYDDLIKQAKATSDQAKRTELYQKAQHILKE 501
           DNGDPDN+L TL GCDAV GNN ++WC K +D+L+ +AK  SD A+RT+LY++AQ + K 
Sbjct: 432 DNGDPDNFLDTLLGCDAVGGNNRAQWCDKEFDELVTKAKEASDVAERTKLYEEAQVVFKR 491

Query: 502 QVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVSV 539
           + P   + HS    PM   V+ F  SP    +F GV +
Sbjct: 492 EAPWATLDHSLSIVPMRKNVEGFVQSPLGDFAFDGVDI 529