Pairwise Alignments

Query, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  237 bits (605), Expect = 7e-67
 Identities = 173/537 (32%), Positives = 267/537 (49%), Gaps = 37/537 (6%)

Query: 11  LGAGLLSGAPSAVAASN-----LVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQFE 65
           L A   +GA +A AA+      LV      P   DP   T   DF      V++ L +F+
Sbjct: 11  LAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVN-VYDGLVRFK 69

Query: 66  RGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDK 125
            G   V P LA  W++SDDGKTYTF LR+GVKFH          F+A+ V F F+RML K
Sbjct: 70  DGTLEVEPALAESWKISDDGKTYTFTLRQGVKFH------DGSNFDAEAVKFNFDRMLKK 123

Query: 126 DNPFRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSA 185
           D+PF    P  FP   +     ++  V  LDEHTV+F L+E  A F+ NLA     I S 
Sbjct: 124 DHPFYDTGP--FPLSFNFA---SVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSP 178

Query: 186 EYADQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAIT 245
              +   K+GK  +  + P GTGPF F ++  + ++  + N DYW     K+  ++F   
Sbjct: 179 VAVE---KHGK--EYGRSPSGTGPFKFVEWLSNQRVVVERNPDYWD-SAAKLQAVVFRPI 232

Query: 246 TDASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGSN 305
           TDA+ R+ ++      V +   P ++   + D N  + +QAG ++ +   N         
Sbjct: 233 TDANTRVAEMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILN--------T 284

Query: 306 EANPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFDPEKA 365
           +  P A  +VRQA + AV+K+ +++ V +G   +A   +PP     + S++  A DPEKA
Sbjct: 285 KQGPFADKRVRQAANYAVNKQTLVDDVLRGTATVAAGPIPPAFNWVESSVEPYAHDPEKA 344

Query: 366 KQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWGEYIK 425
           K LL EAG+ E  ++T +          +   M   +Q+D   +G K KI +YEW  ++ 
Sbjct: 345 KALLAEAGV-ENPQVTFYVTEGGSGM-LDPITMGAAIQADLQAVGFKVKIETYEWNTFLG 402

Query: 426 RSKGGEQG-AMLIGWSGDNGDPDNWLGTLYGCDAV-DGNNFSKWCYK--PYDDLIKQAKA 481
           R   G +G A +   +    DPD         DA+ D   F+   Y     D+L+++A+ 
Sbjct: 403 RVNPGLEGKADMAEMAWMTNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQLDELLEKARR 462

Query: 482 TSDQAKRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVS 538
           ++DQA+R +LY + Q I+ +  P   +A+       +A VK FK+ P  L   +GV+
Sbjct: 463 STDQAERGKLYGEVQSIVHDDAPWLFVANWKQNAVTTAAVKGFKLQPSFLLDLHGVT 519