Pairwise Alignments

Query, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 532 a.a., ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  460 bits (1183), Expect = e-134
 Identities = 229/520 (44%), Positives = 332/520 (63%), Gaps = 12/520 (2%)

Query: 11  LGAGLLSGAPSAVAASN--LVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQFERGG 68
           L    L  A SA AA N  LV+CSE SP  F+P   ++G  F AS++ ++NRL  F+   
Sbjct: 10  LALSALFPAASAWAAGNDTLVYCSEASPESFNPQIASSGPSFVASSQVLYNRLINFDPVK 69

Query: 69  TAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNP 128
              IP LAT+W VS DGKT+TF LR+GV+F++  +FKP+R FNADDVLF+  R  D ++P
Sbjct: 70  NTPIPSLATEWSVSPDGKTWTFTLRKGVQFNSNKFFKPTRDFNADDVLFSVLRQKDANHP 129

Query: 129 FRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYA 188
           +       + YF D+G+DK I +V+KLD++ V+F L+E +AAF+ +  M FASI S+EYA
Sbjct: 130 YHNVSQGHYEYFHDVGLDKLIKEVKKLDDYHVQFVLSEPNAAFLADWGMDFASILSSEYA 189

Query: 189 DQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAITTDA 248
           D +LK G    ++  P+GTGP+   +Y+ D+QIR+  N  YW  E V   +LIF+IT + 
Sbjct: 190 DAMLKKGTPEYVDTWPVGTGPYALQQYKADSQIRYIANPHYWDGE-VPTKHLIFSITPNV 248

Query: 249 SVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGSNEAN 308
             R+ KL+ NECQ+   P P     +K +K+L +      N+GY+A+N         E  
Sbjct: 249 ETRLAKLQTNECQIIPAPSPVQFPVIKGNKDLALHSVEALNVGYLAFN--------TEKK 300

Query: 309 PMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFDPEKAKQL 368
           P   + VRQAL+ A DK+ I+++V+  +G +A + +P     Y   + D  +DP+KAK L
Sbjct: 301 PFDNVLVRQALNYATDKQAIVKAVFLDSGSVAKSPIPANMLGYKKDLPDYDYDPQKAKDL 360

Query: 369 LKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWGEYIKRSK 428
           LK+AG+++G E+TLW+MPVQRPYNPN++ +AEM+Q+DW+K+GIKAKIV+YEWGEY+   +
Sbjct: 361 LKQAGLEKGAEVTLWSMPVQRPYNPNSRRIAEMIQNDWSKVGIKAKIVTYEWGEYLAGMR 420

Query: 429 GGEQGAMLIGWSGDNGDPDNWLGTLYGCDAV-DGNNFSKWCYKPYDDLIKQAKATSDQAK 487
            GE  + L GW  DNGDPDN+ GTL  CD +  G+N ++WC K YD L+K+A   SD   
Sbjct: 421 KGEHDSALFGWMSDNGDPDNFAGTLLSCDNIKTGSNVARWCDKSYDALVKKAILVSDPQA 480

Query: 488 RTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKIS 527
           R +LY +AQ I ++Q P   +A    +    + V  + +S
Sbjct: 481 RAKLYGEAQTIFQQQAPWITLATGKTFYATRSNVSGYSVS 520