Pairwise Alignments

Query, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 547 a.a., peptide ABC transporter substrate-binding protein SapA from Klebsiella michiganensis M5al

 Score =  332 bits (852), Expect = 2e-95
 Identities = 174/541 (32%), Positives = 302/541 (55%), Gaps = 14/541 (2%)

Query: 5   AVIPFLLGAGLLSGAPSA---VAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRL 61
           A +  L G    + A  A   +  S  V+C  G    F+P + ++G   D  A  +++RL
Sbjct: 10  AAVSMLCGQAFAAPALPAHADIRDSGFVYCVSGQVNTFNPQKVSSGLIVDTLAAQLYDRL 69

Query: 62  TQFERGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNR 121
              +     ++P LA  WEV D+G TY FHLR  V F TT +FKP+R FNADDV+FTF R
Sbjct: 70  LDVDPYTYRLVPELAESWEVLDNGATYRFHLRNNVPFQTTAWFKPTRNFNADDVIFTFGR 129

Query: 122 MLDKDNPFRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFAS 181
           + ++D+P+     + FPYF  +    ++  V KLD H+V+F L   DA+F+ +LA  +AS
Sbjct: 130 IFNRDHPWHNVNGSSFPYFDSLQFADSVESVRKLDSHSVEFRLKRPDASFLWHLATHYAS 189

Query: 182 IQSAEYADQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLI 241
           + SAEYA +L ++ +   I+++P+GTGPF  ++Y+    IR + +  YW+ + + +  ++
Sbjct: 190 VMSAEYAAKLAQSDRQEMIDRQPVGTGPFQLAEYRSGQYIRLQRHPAYWRGKPL-MPQVV 248

Query: 242 FAITTDASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKI 301
             + +  + R+ KL   EC V  +P  + +  L+ D  L++  + G N+ ++A+N     
Sbjct: 249 VDLGSGGTGRLSKLLTGECDVLAWPAASQLSILRDDPRLRLTLRPGMNIAWLAFNTAKP- 307

Query: 302 KGSNEANPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFD 361
                  P+   +VR AL +A++ +++++S+Y G  + A + +P   W+YD+  +   ++
Sbjct: 308 -------PLDNPEVRHALALAINNQRLMQSIYYGTAETAASMLPRASWAYDNEARITEYN 360

Query: 362 PEKAKQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWG 421
           P +A+  LK  G+++ T + LW     + +NP+    AE++Q+D A+IG+K  I+  E  
Sbjct: 361 PTEARARLKALGLEKLT-LKLWVPTSSQAWNPSPLKTAELIQADMAQIGVKVIIMPVEGR 419

Query: 422 EYIKRSKGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAV-DGNNFSKWCYKPYDDLIKQAK 480
               R         L GW+ D+ DPD++   L  C A+    N++ WC++ +D+++++A 
Sbjct: 420 FQEARLMDMNHDLTLSGWATDSNDPDSFFRPLLSCAAIASQTNYAHWCHREFDEVLQKAL 479

Query: 481 ATSDQAKRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVSVD 540
            +   A R E Y++AQ IL +++P+ P+A S   Q     +K   +SPF   SF GVS +
Sbjct: 480 TSQQLASRIEAYKEAQRILADELPVLPLASSLRLQAYRYDMKGLVLSPFGNASFAGVSRE 539

Query: 541 K 541
           K
Sbjct: 540 K 540