Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 541 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  721 bits (1860), Expect = 0.0
 Identities = 346/530 (65%), Positives = 414/530 (78%), Gaps = 10/530 (1%)

Query: 10  LLALGLVSQSPVL-LANNLVFCSEGSPAGFDTAQYTSATDNDA-AEPIYNRLVEFERGGT 67
           L+   L++ +P    A NLVFCSEGSPAGFD  QYT+ TD DA AE ++NRL +FERGGT
Sbjct: 10  LVGASLLASAPFAQAATNLVFCSEGSPAGFDPGQYTTGTDFDASAETMFNRLTQFERGGT 69

Query: 68  AVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTFNRMLDKGHRF 127
           AV P LAT W++SD+GL YTFHLREGV+FH+   F P+R FNADDVLFTFNRM+ K   F
Sbjct: 70  AVIPGLATKWDISDDGLTYTFHLREGVKFHTTPYFKPTREFNADDVLFTFNRMISKDDPF 129

Query: 128 RQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFASILSAEYAE 187
           R+AYPTEFPYF  MG+D NI +++K D  TV FTL  VDAAFIQN+AMSFASI SAEYA 
Sbjct: 130 RKAYPTEFPYFTDMGMDTNITQIDKVDDHTVKFTLKDVDAAFIQNMAMSFASIQSAEYAA 189

Query: 188 QLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNLVFSINTDPS 247
           QLL  G+  DINQ+P+GTGPFVF+ YQKDS IRY GNKDYW  ++VKIDNL+F+I TDPS
Sbjct: 190 QLLKEGKAPDINQKPVGTGPFVFKSYQKDSNIRYTGNKDYWKPDDVKIDNLIFAITTDPS 249

Query: 248 VRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYN--------TQHPP 299
           VR+QKL++NECQ+TL PRPADL ALK D TL++  Q GFNLGYIAYN         +   
Sbjct: 250 VRMQKLKKNECQITLFPRPADLKALKEDKTLKMPDQAGFNLGYIAYNVMDKIKGSNEPNV 309

Query: 300 FDRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQLI 359
              L+VRQA+DMAVNK  I+ +VYQ AGQ AVNAMPPTQWSYD +IKDA Y PEKA++L+
Sbjct: 310 LANLKVRQALDMAVNKPQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKDAKYDPEKAKELL 369

Query: 360 QQAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRMKN 419
           ++AGVK GT ITLWAMPVQRPYNPNAKLMAEMLQ+DW K+G  V IVSYEWGEY+KR K 
Sbjct: 370 KEAGVKEGTNITLWAMPVQRPYNPNAKLMAEMLQSDWKKIGLNVNIVSYEWGEYIKRSKG 429

Query: 420 GEHDIALIGWTGDNGDPDNWLGTLYSCDAIGSNNYSQWCDPQYDSLVKQAKQVTDRTQRT 479
           GE+   +IGW+GDNGDPDNWL  L+ CD++  NN+S+WCD ++D LVK+AK+ TD+ +RT
Sbjct: 430 GENQAMIIGWSGDNGDPDNWLNVLFGCDSLAGNNFSKWCDKKFDGLVKEAKRTTDQAKRT 489

Query: 480 ALYQQAQQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSV 529
            LY+QAQ  LK  VP+TP+AHS V QP+   V  FK+SPFG N F GVSV
Sbjct: 490 ELYKQAQHVLKDAVPMTPIAHSTVYQPMRANVQDFKISPFGLNSFYGVSV 539