Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 533 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  704 bits (1816), Expect = 0.0
 Identities = 338/531 (63%), Positives = 410/531 (77%), Gaps = 2/531 (0%)

Query: 1   MRHVTCLSALLALGLVSQSPVL-LANNLVFCSEGSPAGFDTAQYTSATDNDA-AEPIYNR 58
           M   T    LL L L+S +P+   A  LV+CSE SPAGFD +QYTS TD DA AE ++NR
Sbjct: 1   MDRTTFKPLLLTLALISSAPMAQAATTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNR 60

Query: 59  LVEFERGGTAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTFN 118
           L +F+RGGT V P LAT W+VS +GL YTFHLREGV+FH+   FSPSR FNADDVLFTF 
Sbjct: 61  LTQFKRGGTEVEPGLATRWDVSADGLVYTFHLREGVKFHTTDYFSPSRDFNADDVLFTFQ 120

Query: 119 RMLDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFA 178
           R+LD  H FRQAYPTE PYF  MGL+  I  VEK D  TV F LN VDAAF+QNLAMSFA
Sbjct: 121 RLLDPQHPFRQAYPTESPYFTDMGLNTTIKSVEKVDEHTVRFNLNNVDAAFVQNLAMSFA 180

Query: 179 SILSAEYAEQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNL 238
           S+ SAEYA QLL  G+  D+NQ+PIGTGPFVF+RYQKDSQIRY GN  YW   +VK+DNL
Sbjct: 181 SVQSAEYAAQLLKEGKAGDLNQKPIGTGPFVFKRYQKDSQIRYAGNTAYWKPEDVKLDNL 240

Query: 239 VFSINTDPSVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYNTQHP 298
           +FSI  D +VR+QKL+R ECQV+ +PRPAD+  ++ D  LQVL+QPGFNLG++AYN  HP
Sbjct: 241 IFSITPDAAVRLQKLKRGECQVSGYPRPADIEVMEQDPNLQVLKQPGFNLGFLAYNVTHP 300

Query: 299 PFDRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQL 358
           P D+L+VRQA+DMA++K AI++AVYQ AGQ A NA+PP QWS+D +IKDAP+   KA+ L
Sbjct: 301 PLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSFDPNIKDAPHDVTKAKAL 360

Query: 359 IQQAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRMK 418
           +++AGV PGT I LWAM VQR  NPNA++ A+M+Q DW+K+G K  IVSYEWGEY+KR K
Sbjct: 361 LKEAGVAPGTTIDLWAMTVQRASNPNARMSAQMIQQDWAKIGIKANIVSYEWGEYIKRAK 420

Query: 419 NGEHDIALIGWTGDNGDPDNWLGTLYSCDAIGSNNYSQWCDPQYDSLVKQAKQVTDRTQR 478
           NGEHD  + GWTGDNGDPDNWLG LYSC A+  +NY++WCDP YD L++QAK  TDR QR
Sbjct: 421 NGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVKGSNYAKWCDPAYDQLIQQAKVSTDRQQR 480

Query: 479 TALYQQAQQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSV 529
             LY+QAQ+ LKQQVPITP+A+S V QP++ KV  FK+SPFG   F GV +
Sbjct: 481 IDLYRQAQKILKQQVPITPIANSTVFQPVNRKVVDFKLSPFGLTPFYGVGL 531