Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  211 bits (538), Expect = 4e-59
 Identities = 156/511 (30%), Positives = 241/511 (47%), Gaps = 33/511 (6%)

Query: 27  LVFCSEGSPAGFDTAQYTSATDNDAAEPIYNRLVEFERGGTAVHPALATHWEVSDNGLRY 86
           LV      P   D    T+  D      +Y+ LV F+ G   V PALA  W++SD+G  Y
Sbjct: 33  LVVGQIAEPQSLDPHTVTATNDFRILVNVYDGLVRFKDGTLEVEPALAESWKISDDGKTY 92

Query: 87  TFHLREGVRFHSNKAFSPSRTFNADDVLFTFNRMLDKGHRFRQAYPTEFPYFNGMGLDKN 146
           TF LR+GV+FH          F+A+ V F F+RML K H F    P  FP      L  N
Sbjct: 93  TFTLRQGVKFHDGS------NFDAEAVKFNFDRMLKKDHPFYDTGP--FP------LSFN 138

Query: 147 IARVEKTDPL---TVVFTLNTVDAAFIQNLAMSFASILSAEYAEQLLASGRPSDINQQPI 203
            A V+  + L   TV F L+   A F+ NLA     I+S    E+        +  + P 
Sbjct: 139 FASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVEK-----HGKEYGRSPS 193

Query: 204 GTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNLVFSINTDPSVRIQKLRRNECQVTLH 263
           GTGPF F  +  + ++  + N DYW +   K+  +VF   TD + R+ ++      V + 
Sbjct: 194 GTGPFKFVEWLSNQRVVVERNPDYWDS-AAKLQAVVFRPITDANTRVAEMMAGGIDVMVE 252

Query: 264 PRPADLPALKADSTLQVLQQPGFNLGYIAYNTQHPPFDRLEVRQAMDMAVNKEAILQAVY 323
             P +L   + D+   V +Q G ++ +   NT+  PF    VRQA + AVNK+ ++  V 
Sbjct: 253 VPPDNLATFEQDANFAVAEQAGPHVWFTILNTKQGPFADKRVRQAANYAVNKQTLVDDVL 312

Query: 324 QDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQLIQQAGVKPGTEITLWAMPVQRPYNP 383
           +     A   +PP     + S++   + PEKA+ L+ +AGV+   ++T +          
Sbjct: 313 RGTATVAAGPIPPAFNWVESSVEPYAHDPEKAKALLAEAGVE-NPQVTFYVTEGGSGM-L 370

Query: 384 NAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRMK---NGEHDIALIGWTGDNGDPDNWL 440
           +   M   +QAD   +GFKV+I +YEW  +L R+     G+ D+A + W     DPD   
Sbjct: 371 DPITMGAAIQADLQAVGFKVKIETYEWNTFLGRVNPGLEGKADMAEMAWM--TNDPDTVP 428

Query: 441 GTLYSCDAI---GSNNYSQWCDPQYDSLVKQAKQVTDRTQRTALYQQAQQRLKQQVPITP 497
                 DA+   G  N   + +PQ D L+++A++ TD+ +R  LY + Q  +    P   
Sbjct: 429 YLTLRTDAMPDKGGFNSGYYSNPQLDELLEKARRSTDQAERGKLYGEVQSIVHDDAPWLF 488

Query: 498 VAHSIVSQPLSVKVSQFKVSPFGRNDFSGVS 528
           VA+   +   +  V  FK+ P    D  GV+
Sbjct: 489 VANWKQNAVTTAAVKGFKLQPSFLLDLHGVT 519