Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 547 a.a., peptide ABC transporter substrate-binding protein SapA from Klebsiella michiganensis M5al

 Score =  327 bits (839), Expect = 5e-94
 Identities = 181/535 (33%), Positives = 289/535 (54%), Gaps = 15/535 (2%)

Query: 7   LSALLAL-----GLVSQSPVLLAN------NLVFCSEGSPAGFDTAQYTSATDNDA-AEP 54
           LS+LLA      G    +P L A+        V+C  G    F+  + +S    D  A  
Sbjct: 5   LSSLLAAVSMLCGQAFAAPALPAHADIRDSGFVYCVSGQVNTFNPQKVSSGLIVDTLAAQ 64

Query: 55  IYNRLVEFERGGTAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVL 114
           +Y+RL++ +     + P LA  WEV DNG  Y FHLR  V F +   F P+R FNADDV+
Sbjct: 65  LYDRLLDVDPYTYRLVPELAESWEVLDNGATYRFHLRNNVPFQTTAWFKPTRNFNADDVI 124

Query: 115 FTFNRMLDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLA 174
           FTF R+ ++ H +     + FPYF+ +    ++  V K D  +V F L   DA+F+ +LA
Sbjct: 125 FTFGRIFNRDHPWHNVNGSSFPYFDSLQFADSVESVRKLDSHSVEFRLKRPDASFLWHLA 184

Query: 175 MSFASILSAEYAEQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVK 234
             +AS++SAEYA +L  S R   I++QP+GTGPF    Y+    IR + +  YW    + 
Sbjct: 185 THYASVMSAEYAAKLAQSDRQEMIDRQPVGTGPFQLAEYRSGQYIRLQRHPAYWRGKPL- 243

Query: 235 IDNLVFSINTDPSVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYN 294
           +  +V  + +  + R+ KL   EC V   P  + L  L+ D  L++  +PG N+ ++A+N
Sbjct: 244 MPQVVVDLGSGGTGRLSKLLTGECDVLAWPAASQLSILRDDPRLRLTLRPGMNIAWLAFN 303

Query: 295 TQHPPFDRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEK 354
           T  PP D  EVR A+ +A+N + ++Q++Y    + A + +P   W+YD+  +   Y P +
Sbjct: 304 TAKPPLDNPEVRHALALAINNQRLMQSIYYGTAETAASMLPRASWAYDNEARITEYNPTE 363

Query: 355 ARQLIQQAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYL 414
           AR  ++  G++  T + LW     + +NP+    AE++QAD +++G KV I+  E     
Sbjct: 364 ARARLKALGLEKLT-LKLWVPTSSQAWNPSPLKTAELIQADMAQIGVKVIIMPVEGRFQE 422

Query: 415 KRMKNGEHDIALIGWTGDNGDPDNWLGTLYSCDAIGS-NNYSQWCDPQYDSLVKQAKQVT 473
            R+ +  HD+ L GW  D+ DPD++   L SC AI S  NY+ WC  ++D ++++A    
Sbjct: 423 ARLMDMNHDLTLSGWATDSNDPDSFFRPLLSCAAIASQTNYAHWCHREFDEVLQKALTSQ 482

Query: 474 DRTQRTALYQQAQQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVS 528
               R   Y++AQ+ L  ++P+ P+A S+  Q     +    +SPFG   F+GVS
Sbjct: 483 QLASRIEAYKEAQRILADELPVLPLASSLRLQAYRYDMKGLVLSPFGNASFAGVS 537