Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 531 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  833 bits (2153), Expect = 0.0
 Identities = 388/531 (73%), Positives = 456/531 (85%)

Query: 14  MKSRPLRLALVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASAETVFNRLV 73
           M   PLR A+ A LL  A    AKPLVVCTEASPEGFD+VQYTTAVTADA AET+FNRL 
Sbjct: 1   MNMIPLRAAIAAALLSVAVGATAKPLVVCTEASPEGFDMVQYTTAVTADAVAETIFNRLA 60

Query: 74  DFKPGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQ 133
           DFKPGTTE+ PALAE WDIS DGLTYTFHLR+GVKFHTT+YFKPTRD+NADDV+WS  RQ
Sbjct: 61  DFKPGTTEVIPALAESWDISDDGLTYTFHLRKGVKFHTTEYFKPTRDMNADDVVWSFQRQ 120

Query: 134 LDPNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSI 193
           LDPNHPWH  +SVG+PYFESMGFKELLKSV K DEHTV  +L+R EAPFL D+AM F+SI
Sbjct: 121 LDPNHPWHKLSSVGFPYFESMGFKELLKSVEKVDEHTVKFSLTRREAPFLADIAMAFSSI 180

Query: 194 YSAEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALVFA 253
           Y AEY DQLLK+ K  +LNSKP+GTGPF+FQRYNKDAQVRFK NPDYFRGKPPADALV A
Sbjct: 181 YPAEYADQLLKANKAGDLNSKPVGTGPFVFQRYNKDAQVRFKANPDYFRGKPPADALVLA 240

Query: 254 IAIDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLN 313
           IA D+NVR+QKL+ NECQ+ALYPKPDD+PSIK+DP LKV E++A+   Y A+NT HKY++
Sbjct: 241 IATDNNVRMQKLKTNECQIALYPKPDDIPSIKKDPNLKVAELDAMTVSYTALNTSHKYMS 300

Query: 314 DVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLS 373
           DVRVRKAI++AFD++ +V+ LFGKGNA V VNPYPPT++G+N   +NPPR+LDKAR LL 
Sbjct: 301 DVRVRKAIDLAFDKEAYVNALFGKGNATVAVNPYPPTLLGFNHDLKNPPRNLDKARELLK 360

Query: 374 QAGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNG 433
           +AGVPEGTV TLFTRNGGGPTNPNP L A+M+QADL ++G+K+DIRVMEW EML+RAKNG
Sbjct: 361 EAGVPEGTVFTLFTRNGGGPTNPNPMLGAQMMQADLAKVGIKVDIRVMEWGEMLKRAKNG 420

Query: 434 EADLVSTGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRAREVIDNDERA 493
           E D+VS GWAGDNGDPDNFL+P+LSC+A K+GENYARWCN KFQ LI +AR  ++ +ER 
Sbjct: 421 EHDMVSAGWAGDNGDPDNFLTPMLSCEAAKNGENYARWCNEKFQALIDQARATVNPEERI 480

Query: 494 RLYNEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINPLTNNNFATTKVK 544
           +LY +A  +++ + PWISMAH +MFTAMR+NVEGYVI+PLT NNFATT+VK
Sbjct: 481 KLYEQAQVLFNQDLPWISMAHTRMFTAMRNNVEGYVISPLTTNNFATTQVK 531