Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 535 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score =  488 bits (1256), Expect = e-142
 Identities = 251/517 (48%), Positives = 335/517 (64%), Gaps = 4/517 (0%)

Query: 17  RPLRLALVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASAETVFNRLVDFK 76
           +PL L   ALL       AA  LV C+EASP GFD  QYT+    DASAETVFNRL  FK
Sbjct: 7   KPLLLT-TALLACAPLAHAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFK 65

Query: 77  PGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQLDP 136
            G TE++P LA RWD+S DGLTYTFHLR GVKFHTTDYF PTR  NADDVL++ NR LD 
Sbjct: 66  RGGTEVEPGLATRWDVSPDGLTYTFHLRDGVKFHTTDYFTPTRTFNADDVLFTFNRLLDA 125

Query: 137 NHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSIYSA 196
           NHP+        PYF  MG    +KSV K D  TV  TL+  +A F++++AM F SI SA
Sbjct: 126 NHPFRKAYPSESPYFTDMGLNTTIKSVEKVDPLTVKFTLNNIDAAFVQNLAMSFASIQSA 185

Query: 197 EYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKP-PADALVFAIA 255
           EY DQLLK GK  +LN KPIGTGPF+F+RY KD+Q+R+  N  Y++ +    D L+F+I+
Sbjct: 186 EYADQLLKEGKAEDLNQKPIGTGPFVFKRYQKDSQIRYVGNTQYWKPEDVKIDNLIFSIS 245

Query: 256 IDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLNDV 315
            D+ VRLQKL+ANECQV+ YP+P D+  +K+DPKLKV        G++A N  H  L+ +
Sbjct: 246 SDAAVRLQKLKANECQVSGYPRPQDIEEMKKDPKLKVLSQPGFNLGFVAYNVTHPPLDQL 305

Query: 316 RVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLSQA 375
           +VR+A++MA D+   +  ++     L   N  PP    ++   ++ P DL KAR LL +A
Sbjct: 306 KVRQALDMAIDKPAIIKAVYQSAGQL-AENALPPGQWSFDPTIKDAPHDLTKARQLLKEA 364

Query: 376 GVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNGEA 435
           GV  GT I L+       +NPN R+SA+M+Q+D ++IG+K +I   EW E ++RAK GE 
Sbjct: 365 GVAPGTKIDLWAMTVQRASNPNARMSAQMIQSDWEKIGIKANIVSYEWGEYIKRAKAGEH 424

Query: 436 DLVSTGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRAREVIDNDERARL 495
           D +  GW GDNGDPDN+L  L SC AVK G NYA+WC+P + +L+ +A+   + DER + 
Sbjct: 425 DAMIYGWTGDNGDPDNWLGVLYSCAAVK-GSNYAKWCDPAYDKLVQQAKLTSNRDERIKF 483

Query: 496 YNEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINP 532
           Y +A  +   + P   +A+ K+F  MR  V+ + I+P
Sbjct: 484 YQQAQHILKQQVPITPIANSKVFQPMRQEVQDFKISP 520