Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  201 bits (511), Expect = 6e-56
 Identities = 150/486 (30%), Positives = 240/486 (49%), Gaps = 51/486 (10%)

Query: 66  ETVFNRLVDFKPGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADD 125
           +++F+ L+D+ PGTTE++P LAE ++IS DG  +TF LR+GVKFH        R+L A D
Sbjct: 56  KSLFDGLMDYVPGTTELRPDLAESYEISEDGKIFTFKLRKGVKFHN------GRELTAQD 109

Query: 126 VLWSLNRQLDPNHPWHDKTSVGYPYFESM-GFKEL-------LKSVSKADEHTVVITLSR 177
           V +S+ R ++P        S G  +F ++ G +E        L  ++  D HT+   L+R
Sbjct: 110 VKYSIERVVNP-----ATQSPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELTR 164

Query: 178 PEAPFLRDMAMGFTSIYSAEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPN 237
           P+A FL  MA+ F  +   E   ++ K G  A+    P+G+G F    +    ++ F+  
Sbjct: 165 PDATFLHVMALNFAHVVPKE---EVEKHG--ADFGKNPVGSGAFKLAEWTLGQRLVFERF 219

Query: 238 PDYF-RGKPPADALVFAIAIDSNVRLQKLRANECQVALYPKPDDVPSIK-----QDPKLK 291
            DY+  G P  D + F +  +  V L +L+  E  V      D +P  K      DP  K
Sbjct: 220 TDYWNEGLPKLDRITFEVGQEPVVALLRLQNGEIDV----PGDGIPPAKFVEVTNDPNFK 275

Query: 292 VEEIEA--LVTGYIAMNTQHKYLNDVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPP 349
              I    L TGY+ MN +    + V VRKA+NMA ++   +  +   G A+    P PP
Sbjct: 276 DLIIRGGQLHTGYVTMNVKMAPFDKVEVRKAVNMAINKDRILRII--NGRAVAANQPLPP 333

Query: 350 TMIGYNTHNQNPPRDLDKARALLSQAGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADL 409
           +M GY         D + A+ LL QAG+ +G    L+  N    T+P PR+ A+ +Q DL
Sbjct: 334 SMPGYAKDYAGYAYDPEGAKKLLEQAGLGDGFSTELYVMN----TDPQPRI-AQAIQQDL 388

Query: 410 KQIGLKLDIRVMEWAEMLRR-AKNGEADLVSTG---WAGDNGDPDNFLSPLLSC-DAVKS 464
           K IG+   I+ +  A ++    +  +A ++ +G   W  D  DP NF  P+L C  AV  
Sbjct: 389 KAIGITASIKSLAQANVIAAGGEENQAPMIWSGGMAWIADFPDPSNFYGPILGCGGAVPG 448

Query: 465 GENYARWCNPKFQELISRAREVID---NDERARLYNEALKVYDDEQPWISMAHPKMFTAM 521
           G N++ +CN +  +  + A  + D     ER  L+ +      ++ PW  + + + FT  
Sbjct: 449 GWNWSWYCNEELDKKAAEADAIADPAKAAEREALWRDIYLKIMEDAPWAPIFNEERFTIR 508

Query: 522 RDNVEG 527
            + + G
Sbjct: 509 SERIGG 514