Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  249 bits (635), Expect = 2e-70
 Identities = 181/524 (34%), Positives = 254/524 (48%), Gaps = 35/524 (6%)

Query: 21  LALVALLLGGATQLAAKP------LVVCTEASPEGFDIVQYTTAVTADASA-ETVFNRLV 73
           +AL AL   GA    A        LVV   A P+  D   +T   T D      V++ LV
Sbjct: 9   IALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLD--PHTVTATNDFRILVNVYDGLV 66

Query: 74  DFKPGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQ 133
            FK GT E++PALAE W IS DG TYTF LRQGVKFH    F      +A+ V ++ +R 
Sbjct: 67  RFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNF------DAEAVKFNFDRM 120

Query: 134 LDPNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSI 193
           L  +HP++D      P+  S  F  + K+V+  DEHTV   LS   APFL ++A     I
Sbjct: 121 LKKDHPFYDTG----PFPLSFNFASV-KAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLI 175

Query: 194 YSAEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALVFA 253
            S    +   K GK  E    P GTGPF F  +  + +V  + NPDY+       A+VF 
Sbjct: 176 VSPVAVE---KHGK--EYGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAKLQAVVFR 230

Query: 254 IAIDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLN 313
              D+N R+ ++ A    V +   PD++ + +QD    V E       +  +NT+     
Sbjct: 231 PITDANTRVAEMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILNTKQGPFA 290

Query: 314 DVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLS 373
           D RVR+A N A ++QT VD +  +G A V   P PP      +  +    D +KA+ALL+
Sbjct: 291 DKRVRQAANYAVNKQTLVDDVL-RGTATVAAGPIPPAFNWVESSVEPYAHDPEKAKALLA 349

Query: 374 QAGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAK-- 431
           +AGV    V    T  G G  +P    +A  +QADL+ +G K+ I   EW   L R    
Sbjct: 350 EAGVENPQVTFYVTEGGSGMLDPITMGAA--IQADLQAVGFKVKIETYEWNTFLGRVNPG 407

Query: 432 -NGEADLVSTGWAGDNGDPDNFLSPLLSCDAV--KSGENYARWCNPKFQELISRAREVID 488
             G+AD+    W     DPD      L  DA+  K G N   + NP+  EL+ +AR   D
Sbjct: 408 LEGKADMAEMAWM--TNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQLDELLEKARRSTD 465

Query: 489 NDERARLYNEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINP 532
             ER +LY E   +  D+ PW+ +A+ K        V+G+ + P
Sbjct: 466 QAERGKLYGEVQSIVHDDAPWLFVANWKQNAVTTAAVKGFKLQP 509