Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 530 a.a., peptide ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  443 bits (1139), Expect = e-129
 Identities = 224/531 (42%), Positives = 325/531 (61%), Gaps = 1/531 (0%)

Query: 14  MKSRPLRLALVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASAETVFNRLV 73
           M+ R   LAL    L  ++ ++AK LV C+E SPE F+   YT+  + DASA  V+NRLV
Sbjct: 1   MQRRFTTLALALAALTASSAISAKTLVYCSEGSPENFNPQLYTSGTSVDASAVPVYNRLV 60

Query: 74  DFKPGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQ 133
           DFK GTTE+ P+LAE W++S DG  Y FHLR+GVKF +  YFKP+RD NADDV++S  RQ
Sbjct: 61  DFKAGTTELVPSLAESWEVSEDGKVYIFHLRKGVKFQSNKYFKPSRDFNADDVIFSFMRQ 120

Query: 134 LDPNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSI 193
            DP HP+H+ +S  Y  FES+ F +L+ ++ K DE+TV  TL+  EAPF+ D+A  F SI
Sbjct: 121 KDPQHPYHNISSGNYSNFESLEFGQLITAIDKPDEYTVRFTLAHAEAPFVADLAWYFASI 180

Query: 194 YSAEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALVFA 253
            SAEY D +LK+G    ++  PIGTGPF   +Y KD+++ F   P+Y++GK   D L+F+
Sbjct: 181 LSAEYADAMLKAGTPERVDMDPIGTGPFKLAQYQKDSRILFTAFPEYWQGKAHIDRLIFS 240

Query: 254 IAIDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLN 313
           I  D++VR  KL  NECQV  +P P D+P +K++  + +     L TG++A NTQ   L+
Sbjct: 241 ITPDASVRYAKLEKNECQVMPFPNPADLPRMKENKAINLMSKAGLNTGFLAFNTQKAPLD 300

Query: 314 DVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLS 373
           +V+VR+A+ MA ++   ++ +F  G      N  PP +   N+  ++   D  KA+ALL+
Sbjct: 301 NVKVRQALAMAINKPAIIEAVF-HGTGTAAKNLLPPGVWSANSQLKDYEYDPQKAKALLA 359

Query: 374 QAGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNG 433
           ++GV     I L+      P NPN +  AEM+QAD  +IG++  I   EW E L+R K+G
Sbjct: 360 ESGVAGPISIDLWAMPVQRPYNPNAKRMAEMIQADWAKIGVQTKITTYEWGEYLKRVKDG 419

Query: 434 EADLVSTGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRAREVIDNDERA 493
           E      GW    GDPDNF  PL +C +   G N A+WC   F ++I+ A+ + D  +R 
Sbjct: 420 EHQAALMGWTTATGDPDNFFGPLFTCQSANGGSNSAKWCYQPFDKIIAEAKSITDRQKRE 479

Query: 494 RLYNEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINPLTNNNFATTKVK 544
            LY +A ++  D+ P + +AH  +F  +R NV GY I+P   + F    +K
Sbjct: 480 ALYLQAQQMMHDQMPAVMIAHSTIFEPVRKNVSGYEIDPFGKHIFYQVDIK 530