Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 296 a.a., peptide ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  256 bits (655), Expect = 3e-73
 Identities = 129/285 (45%), Positives = 184/285 (64%), Gaps = 1/285 (0%)

Query: 22  PSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGG 81
           PSP +  WQAFA N  A+ GL  +  ++F  LF PW+AP  P  Q    LL PP W   G
Sbjct: 13  PSPMRRLWQAFASNPFALAGLWVIIGLLFFTLFGPWLAPFSPEAQNPKALLLPPSWDPAG 72

Query: 82  TWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIM 141
           T +  LGTD+LGRD+ SR++ G +L+  + L+ V+ +L+ G ++G ++G    L    + 
Sbjct: 73  TVEHFLGTDDLGRDIFSRILHGVQLTFGMSLAVVITALLLGFVIGAISGMMKGLKSSILG 132

Query: 142 RLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTA 201
            L+D +L++PSLL+A+ +VA+LGPGL N   A+ I   P +VR    A+  EL ++YVTA
Sbjct: 133 HLLDALLSIPSLLMAILVVAVLGPGLGNVFWAVGIALTPQFVRAIHQAIHEELQKEYVTA 192

Query: 202 ARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTML 261
           ARL GA   ++ +  ++PN    +I+Q TL+ S+AILD AALGFL LG Q P+PEWG M+
Sbjct: 193 ARLDGANSAQIFWYVIMPNVWEVVIIQTTLAISTAILDIAALGFLNLGAQAPSPEWGAMV 252

Query: 262 ASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLKN 306
               D +  A W +++PGL IL +VLA+NL+GDGLR AL P +KN
Sbjct: 253 FQGLDNLLTAPWTMTIPGLAILFTVLAVNLVGDGLRSALAP-IKN 296