Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 325 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  363 bits (932), Expect = e-105
 Identities = 181/284 (63%), Positives = 218/284 (76%)

Query: 22  PSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGG 81
           P P  EFW  F+ NKGAV GL F+ ++V  ALFAP VAPH P E        PP WLEGG
Sbjct: 41  PHPLAEFWHYFSENKGAVAGLIFIVVIVIVALFAPQVAPHHPYEMNVPMAKMPPAWLEGG 100

Query: 82  TWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIM 141
            W ++LGTD LGRD+LSR+I GARLSL++G   V +SL+ G+ LGLLAGF    +   IM
Sbjct: 101 QWSYLLGTDALGRDILSRIIFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIM 160

Query: 142 RLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTA 201
           RLMD++L++PSLLLA+AIVAILGPGL N + AIA+V LP Y RLTRAAVM E  +DYVTA
Sbjct: 161 RLMDIILSVPSLLLAIAIVAILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTA 220

Query: 202 ARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTML 261
           +R+AGA   RLM  T+LPN +APLIVQATL FS+AILDAAALGFLGLG +PP PEWGTML
Sbjct: 221 SRVAGASKGRLMVKTILPNTLAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTML 280

Query: 262 ASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK 305
           + AR+++   WW+V+ PGL IL +VLA NLMGDGLRDALDP++K
Sbjct: 281 SEAREFVLSHWWIVTFPGLAILFTVLAFNLMGDGLRDALDPRMK 324