Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 310 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  237 bits (604), Expect = 3e-67
 Identities = 131/297 (44%), Positives = 177/297 (59%), Gaps = 11/297 (3%)

Query: 8   SVSPASPVDQSLLYPSPYKEFWQAFARNKGAVMGLA-FMCLVVFCALFAPWVAPHDPSEQ 66
           S SPAS +   L     +   W  F RN  AV+GLA F+CLV+  A FAPW+APHDP   
Sbjct: 22  SDSPASRLQARL---GRFYSGWLVFIRNPLAVIGLAIFLCLVIL-ATFAPWIAPHDPLFG 77

Query: 67  YRDFLLTPPVWLEGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLG 126
                L PP     G W   LGTD+ GRD+ SR++ G+R +L+I     + +   G+L+G
Sbjct: 78  TLSERLLPP---SAGHW---LGTDQQGRDIWSRIVFGSRTTLMIIFLVAITAAPVGLLIG 131

Query: 127 LLAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLT 186
             AGF   ++  ++MRL D  LA P L+LA+A  A LG GL N V+AIA+ + P Y R+ 
Sbjct: 132 TTAGFVGGIVEAALMRLTDAFLAFPKLILALAFAAALGAGLENAVLAIALTAWPPYARIA 191

Query: 187 RAAVMGELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFL 246
           RA  +     D+V AAR+ G+   R++   ++P C+  L+V+ +L  +  IL AA LGFL
Sbjct: 192 RAETLAVRRTDFVAAARMCGSSPLRILIGQIMPMCIPSLVVRVSLDMAGVILIAAGLGFL 251

Query: 247 GLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPK 303
           GLGV PP PEWG M++  R  I   WWV + PG+ I +  L  NL+GDGLRD LDPK
Sbjct: 252 GLGVAPPQPEWGAMVSEGRSQILAQWWVCTYPGIAICIVSLGFNLLGDGLRDVLDPK 308