Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 291 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  236 bits (601), Expect = 6e-67
 Identities = 127/272 (46%), Positives = 176/272 (64%), Gaps = 6/272 (2%)

Query: 32  FARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDE 91
           F RNK AV G   +      AL APW++P DP +     +   P  L    W   LGTDE
Sbjct: 24  FLRNKSAVTGAVLVITFALLALLAPWISPFDPIKADFMAVRKAPSALH---W---LGTDE 77

Query: 92  LGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALP 151
           LGRD+LSRL  GAR SL+ G  SV+++++ G+ LGL+AGF+   L   I R+++ +L+ P
Sbjct: 78  LGRDILSRLFWGARTSLMAGCVSVIIAIVIGVPLGLIAGFWQGWLDSVISRVVEALLSCP 137

Query: 152 SLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPR 211
            L+LA+A+ A LGP L N +IAI + S+P + RLTRA VM   N +Y+  AR  G     
Sbjct: 138 FLVLAIALGAFLGPSLGNAMIAIGLSSMPIFARLTRAQVMSIRNEEYIEGARAIGLPDRW 197

Query: 212 LMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERA 271
           +++  VLPN ++P++VQATL+ +SAI+  A+L FLGLG QPP   WG ML +AR ++E++
Sbjct: 198 ILWRYVLPNVLSPILVQATLAIASAIITEASLSFLGLGQQPPDASWGAMLNTARSFLEQS 257

Query: 272 WWVVSLPGLTILLSVLAINLMGDGLRDALDPK 303
            W+   PGL I L+V   NL+GDGLRDALDP+
Sbjct: 258 PWMSIFPGLAIFLTVQGFNLLGDGLRDALDPR 289