Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 297 a.a., ABC-type dipeptide/oligopeptide/nickel transport system, permease component from Dechlorosoma suillum PS

 Score =  217 bits (553), Expect = 2e-61
 Identities = 123/298 (41%), Positives = 179/298 (60%), Gaps = 11/298 (3%)

Query: 4   PIPKSVSPASPVDQSLLYPSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDP 63
           P+P + +PA P        S +   W+   R+  A+   A + L+V  A+FAPW+AP DP
Sbjct: 8   PLPAAAAPAQPSR------SYWTVVWRQLRRDPMAMASAAVLLLIVGAAVFAPWLAPADP 61

Query: 64  SEQYRDFLLTPPVWLEGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGI 123
            +      L P      G+  F+LGTDELGRDL SRL+ G RLSLL+G+  V+ +   G 
Sbjct: 62  YKASMIKRLLPI-----GSPGFLLGTDELGRDLFSRLMHGGRLSLLMGVVPVLAAFGIGT 116

Query: 124 LLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYV 183
            +GLLAG+    +  +IMR++D+  A PS+LLAVAI   LGPG+ N++IA+ +V +P  V
Sbjct: 117 TIGLLAGYVGGRVNMAIMRVLDIFYAFPSVLLAVAISGALGPGMSNSLIALTLVFVPQVV 176

Query: 184 RLTRAAVMGELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAAL 243
           R+  +        DY+ AAR++GAG   ++   VL N + P+ V AT   S +++ A+ L
Sbjct: 177 RVAESVTTQVRQLDYIEAARMSGAGAFSIIRTHVLGNVLGPVFVYATGLLSVSMILASGL 236

Query: 244 GFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALD 301
            FLGLGV+PP PEWG ML + R  I    WV +LPG+ I ++ +A NL+ D +R A+D
Sbjct: 237 SFLGLGVKPPEPEWGLMLNTLRSAIYSNPWVAALPGVLIFVTSIAFNLLADSVRSAMD 294