Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  253 bits (645), Expect = 1e-71
 Identities = 134/257 (52%), Positives = 175/257 (68%), Gaps = 1/257 (0%)

Query: 3   LLQINNLNVRF-GDANAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAPGR 61
           +L ++NL   F  D     VV G+   + A E +A+VGESGSGKSVT +++M L    G 
Sbjct: 27  VLSVSNLMCSFRADGLWSSVVQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNSPRGT 86

Query: 62  ITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHLGL 121
               S+   G ++L LS  + R++ G DIAM+FQ+PMT+LNP  T+GFQI E L  H GL
Sbjct: 87  KIEGSVKLGGKELLSLSDAEMRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILHRGL 146

Query: 122 KGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTT 181
               A    + LL+KV IPAA+SR   YPH+ SGGM QRV IAMA+A +PKLLIADEPTT
Sbjct: 147 SRAQAENETIRLLEKVRIPAAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADEPTT 206

Query: 182 ALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPELF 241
           ALDVTIQAQI+EL+  LQ+E  M+++ ITHD+ VVAE A R  VMY GQAVE     ++F
Sbjct: 207 ALDVTIQAQILELIKELQQEDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTDDIF 266

Query: 242 DVPAHPYSEALLAAIPE 258
           + P HPY+ +LL+A+P+
Sbjct: 267 NRPNHPYTRSLLSAVPK 283



 Score =  173 bits (438), Expect = 1e-47
 Identities = 97/243 (39%), Positives = 146/243 (60%), Gaps = 15/243 (6%)

Query: 19  VPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAPGRITADSLTFDGTDMLKLS 78
           V  V+ +   + AGE LA+VGESG GKS T  ++M L++  G +    +  DG D+LKLS
Sbjct: 347 VHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMRLVEPSGGL----VLLDGVDVLKLS 402

Query: 79  GRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHLGLKGKAARQ----RALELL 134
             + R      + M+FQDP  +LNP   +G  I E L     + GK  +     +  ELL
Sbjct: 403 QNELRHQ-RNHMQMIFQDPYASLNPRMNIGTAIAEPLL----INGKGGQSEVADKVAELL 457

Query: 135 KKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTTALDVTIQAQIMEL 194
           +KV +    ++   +PH+ SGG  QR+ IA A+A EPKL++ADE  +ALDV++++Q++ L
Sbjct: 458 QKVGLSPDMAK--RFPHEFSGGQRQRICIARALALEPKLIVADEAVSALDVSVKSQVVNL 515

Query: 195 LVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPELFDVPAHPYSEALLA 254
           +++LQ    +A + I+HD+AVV   + RV VMY G+ VE G    +F  P HPY+  LL+
Sbjct: 516 MLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIFQNPQHPYTRRLLS 575

Query: 255 AIP 257
           A+P
Sbjct: 576 AVP 578