Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  253 bits (646), Expect = 8e-72
 Identities = 136/257 (52%), Positives = 176/257 (68%), Gaps = 2/257 (0%)

Query: 3   LLQINNLNVRFGD-ANAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAP-G 60
           LL++ +L V F     A     G+   VDAGE L I+GESGSGKSV+  A+MGLID P G
Sbjct: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65

Query: 61  RITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHLG 120
            I A S+ + G D+  LS  +RR + G+ IAM+FQDP++ LNP YT+G+Q+EEV   H  
Sbjct: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125

Query: 121 LKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPT 180
             G  ARQRA+E+L +V IP  E R+D YPHQ SGG  QR+ I MAIA  P++LIADEPT
Sbjct: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185

Query: 181 TALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPEL 240
           TALDV++QAQI+ELL  LQ E  +A+I+ITHDL V A  A RV VM +G+ VE G+   +
Sbjct: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245

Query: 241 FDVPAHPYSEALLAAIP 257
           F+ PAH Y+  L+ A+P
Sbjct: 246 FENPAHSYTRTLINALP 262



 Score =  162 bits (411), Expect = 1e-44
 Identities = 101/242 (41%), Positives = 137/242 (56%), Gaps = 16/242 (6%)

Query: 22  VDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAPGRITADSLTFDGTDMLKLSGRQ 81
           V  L   V AGE + IVGESGSGKS     L+GL +A G        F G D+LK+  +Q
Sbjct: 306 VKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASG----GEALFHGRDVLKMDRKQ 361

Query: 82  ----RRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHLGLKGKAA-RQRALELLKK 136
               RRKV      MVFQDP +++NP  TV   + E  R H  +  K   R R  ELL  
Sbjct: 362 LLAFRRKV-----QMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGL 416

Query: 137 VEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTTALDVTIQAQIMELLV 196
           V +    ++   YPHQ SGG  QR+AIA A+A +P+L++ DE  +ALDV++Q Q+++LL 
Sbjct: 417 VGLNPEHAK--RYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLA 474

Query: 197 NLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPELFDVPAHPYSEALLAAI 256
            L+    +A I ITHDL +V   A R+ VM +G+ VE     E+F  P H Y+  L+ A 
Sbjct: 475 ELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINAT 534

Query: 257 PE 258
           P+
Sbjct: 535 PK 536