Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 326 a.a., putative dipeptide transport ATP-binding protein DppD from Phaeobacter inhibens DSM 17395

 Score =  275 bits (703), Expect = 1e-78
 Identities = 141/321 (43%), Positives = 201/321 (62%), Gaps = 1/321 (0%)

Query: 3   LLQINNLNVRFGDANA-VPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAPGR 61
           +L I +L V     +A +   D +   +  GEIL +VGESG+GKS+   A++GL++ P R
Sbjct: 5   VLSIRDLVVEIPTRHARLCATDKVSYDIAPGEILGVVGESGAGKSMAGNAVIGLLNPPAR 64

Query: 62  ITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHLGL 121
           IT   +  +G  +  L   + R++ GK+I M+FQDP+T+LNP   +G Q+ E + +HL L
Sbjct: 65  ITGGEIRLNGQRIDNLPREKMRRLRGKEIGMIFQDPLTSLNPLLRIGDQLTETMMEHLEL 124

Query: 122 KGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTT 181
               AR RA+  L++V IPAA  R+D+YPH+ SGGM QRV IA+A+  EP L+IADEPTT
Sbjct: 125 TKPEARARAIAALEEVGIPAASERIDSYPHEFSGGMRQRVVIALALCAEPSLIIADEPTT 184

Query: 182 ALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPELF 241
           ALDV++QAQI+ LL  L +ER  A++LITHD+ V+AE A RV VMYAG+  E+G V ++ 
Sbjct: 185 ALDVSVQAQIIALLKRLCRERGTAVMLITHDMGVIAEAADRVAVMYAGRMAEIGDVRDVV 244

Query: 242 DVPAHPYSEALLAAIPEHSIGAERLATLPGIVPGRYDRPVGCLLSPRCPYVQDNCRRQRP 301
             P HPY++ L+ + P  S G  RL  +PG +P  +  P GC  SPRC    + CR   P
Sbjct: 245 TRPRHPYTDGLMGSTPSASAGQHRLRQIPGAMPRLHSLPPGCAFSPRCERANERCRNSPP 304

Query: 302 PLDPQAHSLVRCFYPLNQEVA 322
           P     +    C++ +  E A
Sbjct: 305 PTLEADNGRSACWHAIKLEGA 325