Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 330 a.a., dipeptide transport ATP-binding protein DppD from Phaeobacter inhibens DSM 17395

 Score =  280 bits (715), Expect = 4e-80
 Identities = 143/302 (47%), Positives = 198/302 (65%), Gaps = 1/302 (0%)

Query: 1   MSLLQINNLNVRFGDAN-AVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAP 59
           MSLL + +L V+F   +  V  ++ +   +  GE L IVGESG+GKS+T  +LM L+  P
Sbjct: 1   MSLLSVRDLTVKFAMRDHTVTALNQISFDLGKGERLGIVGESGAGKSITGFSLMNLLSRP 60

Query: 60  GRITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHL 119
           G I +  + F   D++KLS  + RK+ G  +AM+FQDPM  LNP  T+G Q+ E L+ H 
Sbjct: 61  GFIDSGQILFGDKDIVKLSDAEMRKIRGNRMAMIFQDPMVTLNPVLTIGQQMVETLKAHR 120

Query: 120 GLKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEP 179
            L    A Q A+  L++V IP+ E RL+ YPH+LSGGM QR+ IAMA+  +P+L+IADEP
Sbjct: 121 SLSKAEAEQIAILKLREVYIPSPEERLNQYPHELSGGMRQRIIIAMALLLDPELIIADEP 180

Query: 180 TTALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPE 239
           TTALDVTIQA IMELL+ L +   + LILITHDL VV++   R  VMYAG+ +E G   E
Sbjct: 181 TTALDVTIQADIMELLLELCQSNKVGLILITHDLGVVSQMTERTLVMYAGRLIEAGPTRE 240

Query: 240 LFDVPAHPYSEALLAAIPEHSIGAERLATLPGIVPGRYDRPVGCLLSPRCPYVQDNCRRQ 299
           + + P HPY++ L+ A+P+ ++  +RL  +PG +PG    P GC  SPRC Y  D+CR+ 
Sbjct: 241 IINDPQHPYTQGLINALPQQTLPGQRLKQIPGNMPGLASIPPGCPFSPRCEYAVDHCRKV 300

Query: 300 RP 301
            P
Sbjct: 301 LP 302