Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 670 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Dechlorosoma suillum PS

 Score =  288 bits (736), Expect = 3e-82
 Identities = 158/319 (49%), Positives = 199/319 (62%), Gaps = 2/319 (0%)

Query: 3   LLQINNLNVRF-GDANAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAPGR 61
           LL + NL   F      +  VDG+   V  GE  A++GESG GKS T +AL+ L+   GR
Sbjct: 4   LLSVRNLKAGFLAGGRVLTAVDGVSFAVAPGETFALLGESGCGKSATALALLRLLPNAGR 63

Query: 62  ITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHLGL 121
           I    +  +G ++L L     R   G   AM+FQ+P T+LNP  T+G QI E L +H G+
Sbjct: 64  IQGGEVWLEGEEILALPEAAMRDRRGSAAAMIFQEPATSLNPVLTIGRQIGESLERHRGM 123

Query: 122 KGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTT 181
           KG+AAR+ AL LL  V I   E RL+ YP QLSGGM QR  IA+A+AGEP+LLIADEPTT
Sbjct: 124 KGEAARREALALLTAVGIADPERRLEEYPFQLSGGMKQRAMIAIALAGEPRLLIADEPTT 183

Query: 182 ALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPELF 241
           ALDVTIQAQI++LL  LQ ER M ++LITHDL VVA +A RV VMYAG+ VE     E F
Sbjct: 184 ALDVTIQAQILDLLARLQAERAMGMLLITHDLGVVARSAHRVGVMYAGEIVETAPRQEFF 243

Query: 242 DVPAHPYSEALLAAIPEHSIGAERLATLPGIVPGRYDRPVGCLLSPRCPYVQDNCRRQRP 301
             P HPY++ L AA+P+      +LAT+PG VPG    P GC  +PRCP   D CR + P
Sbjct: 244 ASPRHPYTQKLFAALPDLGQRGAQLATIPGQVPGLAAMPAGCRFAPRCPVAMDRCRLESP 303

Query: 302 P-LDPQAHSLVRCFYPLNQ 319
              + +A   VRC +   Q
Sbjct: 304 GWTELEAGHQVRCHWVAQQ 322



 Score =  218 bits (554), Expect = 4e-61
 Identities = 136/327 (41%), Positives = 186/327 (56%), Gaps = 20/327 (6%)

Query: 2   SLLQINNLNVRFG--------DANAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALM 53
           +LL +  L V F             V  VDG+ L++  G  LA+VGESG GK+    A++
Sbjct: 350 NLLAVGELKVHFPIRKGLFKRTVGHVKAVDGVSLELQRGRTLALVGESGCGKTTAGKAVL 409

Query: 54  GLIDAPGRITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEE 113
            L+ A G     S+  DG ++L L  R+  K + + + MVFQDP  +LNP  TVG  IEE
Sbjct: 410 RLLPATG-----SVRLDGRELLGLPEREL-KPLRRRMQMVFQDPFASLNPRLTVGEIIEE 463

Query: 114 VLRQHLGLKGKAARQRALE-LLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPK 172
            +        +  R+ AL  LL+ V +PA    L  YPH+ SGG  QR+AIA A+A +P+
Sbjct: 464 GMTALRVAASRDERRAALAALLESVGLPA--EALGRYPHEFSGGQRQRIAIARALAVQPE 521

Query: 173 LLIADEPTTALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAV 232
           LL+ DEPT+ALDV++QAQI+ LL  LQ+E  +A + ITH+ AVV   A  V VMY G+ V
Sbjct: 522 LLVCDEPTSALDVSVQAQILNLLRRLQEELGLAYLFITHNFAVVEYLAHDVAVMYLGRIV 581

Query: 233 EVGQVPELFDVPAHPYSEALLAAIPEHSIGAER-LATLPGIVPGRYDRPVGCLLSPRCPY 291
           E G V ++   P HPY+ ALL+A+PE  +  +R +  LPG  P     P GC   PRC  
Sbjct: 582 EQGPVQQVLAAPCHPYTRALLSAVPEPRLAGQREMVRLPGETPSPARPPQGCHFHPRCAQ 641

Query: 292 VQDNCRRQRPPLDPQAHS-LVRC-FYP 316
             + CR++ P    QA   +VRC  YP
Sbjct: 642 ASERCRQEYPAPSTQAGGVVVRCHLYP 668