Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  265 bits (676), Expect = 3e-75
 Identities = 139/282 (49%), Positives = 188/282 (66%), Gaps = 2/282 (0%)

Query: 4   VLSARELTRHYEVSRGLFKG-HALVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTL 62
           VL    LT+ +EV  GLF      V A+  VSF ++AG+TLA+VGESGCGKST  R++  
Sbjct: 323 VLEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMR 382

Query: 63  IEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLINT 122
           + EPS G + + G +V   S+ E +  R  +QM+FQ PYASLNPR  IG  +AEPLLIN 
Sbjct: 383 LVEPSGGLVLLDGVDVLKLSQNELRHQRNHMQMIFQDPYASLNPRMNIGTAIAEPLLING 442

Query: 123 SLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTS 182
              ++E  DKV +++++VGL P+  +R+PH FSGGQRQRI +ARA+ L+PK++VADE  S
Sbjct: 443 KGGQSEVADKVAELLQKVGLSPDMAKRFPHEFSGGQRQRICIARALALEPKLIVADEAVS 502

Query: 183 ALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIY 242
           ALDVS+++QV+NL +DLQ     AY+FISH++AVV  V+ +V VMYLG   E G +E I+
Sbjct: 503 ALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIF 562

Query: 243 AKPLHPYTQALLSATPAIHPDPLKPKIRIVG-ELPNPLNPPD 283
             P HPYT+ LLSA P   P     K  +   E+ +P  P D
Sbjct: 563 QNPQHPYTRRLLSAVPIADPARRLQKRTVSNDEIKSPFRPAD 604



 Score =  207 bits (526), Expect = 7e-58
 Identities = 111/268 (41%), Positives = 171/268 (63%), Gaps = 14/268 (5%)

Query: 30  LNGVSFELEAGKTLAVVGESGCGKSTLARALTLIEEPSS----GSLQIAGTEVKGASKAE 85
           + GVSF++ A +T+AVVGESG GKS  A ++  +  P      GS+++ G E+   S AE
Sbjct: 47  VQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNSPRGTKIEGSVKLGGKELLSLSDAE 106

Query: 86  RKQLR-RDVQMVFQSPYASLNPRQKIGDQLAEPLLINTSLSKAERRDKVQKMMEQVGL-- 142
            +Q+R  D+ M+FQ P  SLNP   IG Q+AE L+++  LS+A+  ++  +++E+V +  
Sbjct: 107 MRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILHRGLSRAQAENETIRLLEKVRIPA 166

Query: 143 RPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSALDVSIQAQVLNLFMDLQKE 202
               +  YPH FSGG RQR+ +A A+  +PK+L+ADEPT+ALDV+IQAQ+L L  +LQ+E
Sbjct: 167 AKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADEPTTALDVTIQAQILELIKELQQE 226

Query: 203 FNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIYAKPLHPYTQALLSATPAI-- 260
              + +FI+H++ VV  +AD+ +VMY G+  E    +DI+ +P HPYT++LLSA P +  
Sbjct: 227 DGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTDDIFNRPNHPYTRSLLSAVPKLGS 286

Query: 261 ---HPDPLKPKI--RIVGELPNPLNPPD 283
                 P++  +  R  GE   P+  PD
Sbjct: 287 MAGRSRPMRFPVVDRSTGEADVPVEVPD 314