Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 321 a.a., dipeptide transport ATP-binding protein DppF from Phaeobacter inhibens DSM 17395

 Score =  278 bits (710), Expect = 2e-79
 Identities = 144/329 (43%), Positives = 218/329 (66%), Gaps = 18/329 (5%)

Query: 1   MAVVLSARELTRHYEVSRG--------LFKGHALVRALNGVSFELEAGKTLAVVGESGCG 52
           M  ++S  ELTR ++VS+         L K H  + A++ VSF+++     ++VGESG G
Sbjct: 1   MNAIVSVNELTRVFDVSKPWLNRVLERLPKSH--LTAVSDVSFDIKEKTVYSLVGESGSG 58

Query: 53  KSTLARALTLIEEPSSGSLQIAGTEVKGASKAERKQLRRD-VQMVFQSPYASLNPRQKIG 111
           KST+ + +  + E SSG+++++G ++   + A      RD +QM+FQ PYAS+NPR ++ 
Sbjct: 59  KSTIGKMVVGLLENSSGAVKVSGVDLNRETDAVAITKARDAIQMIFQDPYASMNPRWRVR 118

Query: 112 DQLAEPLLINTSLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQ 171
           D +AEP+    +    E ++  ++++EQVGL  E   ++PH FSGGQRQRI +AR++  Q
Sbjct: 119 DIIAEPV----AAKGGETKELAERLLEQVGLSAEDADKFPHEFSGGQRQRICIARSLASQ 174

Query: 172 PKVLVADEPTSALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGR 231
           P+++V DEPTSALDVS+QAQVLNL  DL+ +    Y+FISH+L VVRH++D++ V+YLGR
Sbjct: 175 PRLIVCDEPTSALDVSVQAQVLNLMSDLKDDLGLTYLFISHDLTVVRHISDRIGVLYLGR 234

Query: 232 PAEMGPKEDIYAKPLHPYTQALLSATPAIHPDPLKPKIR-IVGELPNPLNPPDGCAFHKR 290
             E    +D++  P HPYTQ LL+A P +  D    ++    GE+P+P+NPP GCAFH R
Sbjct: 235 LVEEAAPDDLFEAPKHPYTQMLLAAAPKM--DAFGREVEPPQGEIPDPINPPSGCAFHPR 292

Query: 291 CPYATERCAKEVPALRQVSTRQVACHYAE 319
           CP AT +C++  P +R ++  +VACH AE
Sbjct: 293 CPIATAQCSQVRPQMRNINGSRVACHLAE 321