Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 670 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Dechlorosoma suillum PS

 Score =  303 bits (775), Expect = 1e-86
 Identities = 161/318 (50%), Positives = 216/318 (67%), Gaps = 8/318 (2%)

Query: 4   VLSARELTRHYEVSRGLFK---GHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARAL 60
           +L+  EL  H+ + +GLFK   GH  V+A++GVS EL+ G+TLA+VGESGCGK+T  +A+
Sbjct: 351 LLAVGELKVHFPIRKGLFKRTVGH--VKAVDGVSLELQRGRTLALVGESGCGKTTAGKAV 408

Query: 61  TLIEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLL- 119
             +  P++GS+++ G E+ G  + E K LRR +QMVFQ P+ASLNPR  +G+ + E +  
Sbjct: 409 LRLL-PATGSVRLDGRELLGLPERELKPLRRRMQMVFQDPFASLNPRLTVGEIIEEGMTA 467

Query: 120 INTSLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADE 179
           +  + S+ ERR  +  ++E VGL  E   RYPH FSGGQRQRIA+ARA+ +QP++LV DE
Sbjct: 468 LRVAASRDERRAALAALLESVGLPAEALGRYPHEFSGGQRQRIAIARALAVQPELLVCDE 527

Query: 180 PTSALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKE 239
           PTSALDVS+QAQ+LNL   LQ+E   AY+FI+HN AVV ++A  V VMYLGR  E GP +
Sbjct: 528 PTSALDVSVQAQILNLLRRLQEELGLAYLFITHNFAVVEYLAHDVAVMYLGRIVEQGPVQ 587

Query: 240 DIYAKPLHPYTQALLSATPAIHPDPLKPKIRIVGELPNPLNPPDGCAFHKRCPYATERCA 299
            + A P HPYT+ALLSA P       +  +R+ GE P+P  PP GC FH RC  A+ERC 
Sbjct: 588 QVLAAPCHPYTRALLSAVPEPRLAGQREMVRLPGETPSPARPPQGCHFHPRCAQASERCR 647

Query: 300 KEVPA-LRQVSTRQVACH 316
           +E PA   Q     V CH
Sbjct: 648 QEYPAPSTQAGGVVVRCH 665



 Score =  194 bits (494), Expect = 4e-54
 Identities = 124/331 (37%), Positives = 179/331 (54%), Gaps = 17/331 (5%)

Query: 1   MAVVLSARELTRHYEVSRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARAL 60
           M+ +LS R L        G   G  ++ A++GVSF +  G+T A++GESGCGKS  A AL
Sbjct: 1   MSDLLSVRNL------KAGFLAGGRVLTAVDGVSFAVAPGETFALLGESGCGKSATALAL 54

Query: 61  TLIEEPSSGSLQ-----IAGTEVKGASKAERKQLRRDVQ-MVFQSPYASLNPRQKIGDQL 114
             +  P++G +Q     + G E+    +A  +  R     M+FQ P  SLNP   IG Q+
Sbjct: 55  LRLL-PNAGRIQGGEVWLEGEEILALPEAAMRDRRGSAAAMIFQEPATSLNPVLTIGRQI 113

Query: 115 AEPLLINTSLSKAERRDKVQKMMEQVGLR-PEH-YQRYPHMFSGGQRQRIALARAMMLQP 172
            E L  +  +     R +   ++  VG+  PE   + YP   SGG +QR  +A A+  +P
Sbjct: 114 GESLERHRGMKGEAARREALALLTAVGIADPERRLEEYPFQLSGGMKQRAMIAIALAGEP 173

Query: 173 KVLVADEPTSALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRP 232
           ++L+ADEPT+ALDV+IQAQ+L+L   LQ E     + I+H+L VV   A +V VMY G  
Sbjct: 174 RLLIADEPTTALDVTIQAQILDLLARLQAERAMGMLLITHDLGVVARSAHRVGVMYAGEI 233

Query: 233 AEMGPKEDIYAKPLHPYTQALLSATPAIHPDPLKPKIRIVGELPNPLNPPDGCAFHKRCP 292
            E  P+++ +A P HPYTQ L +A P +     +    I G++P     P GC F  RCP
Sbjct: 234 VETAPRQEFFASPRHPYTQKLFAALPDLGQRGAQ-LATIPGQVPGLAAMPAGCRFAPRCP 292

Query: 293 YATERCAKEVPALRQVST-RQVACHYAEQFL 322
            A +RC  E P   ++    QV CH+  Q L
Sbjct: 293 VAMDRCRLESPGWTELEAGHQVRCHWVAQQL 323