Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 672 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein from Marinobacter adhaerens HP15

 Score =  283 bits (725), Expect = 6e-81
 Identities = 135/312 (43%), Positives = 206/312 (66%), Gaps = 3/312 (0%)

Query: 4   VLSARELTRHYEVSRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLI 63
           +L+   ++  + V RG+F     ++AL+ VS  L+ G+ LA+VGESGCGK+TL R +  +
Sbjct: 352 ILTVDHVSCTFSVRRGMFGKRKPLQALDDVSLTLKKGEVLALVGESGCGKTTLTRTIMGL 411

Query: 64  EEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLINTS 123
           + PS+GS+ + G  ++     +R ++   +Q +FQ PY+SLNPR+ IG+ +A+PL ++  
Sbjct: 412 QAPSTGSVTLNGQRIENLPPMDRARM---IQPIFQDPYSSLNPRKTIGEIIAKPLFVHGI 468

Query: 124 LSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSA 183
            S  E+  +V+KMME VGL    +  YP   SGGQRQR A+ RA++L P+V++ DEPTSA
Sbjct: 469 GSNQEQHQQVRKMMELVGLPSRVFNSYPDQLSGGQRQRAAIGRALILNPEVVICDEPTSA 528

Query: 184 LDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIYA 243
           LDVS+QAQ+LNL +DL+ E +  Y+F++HNL+VV+H+AD+V VMYLG   E G ++ + +
Sbjct: 529 LDVSVQAQILNLLLDLRDELDLTYLFVTHNLSVVQHMADRVAVMYLGEIVECGERDQVMS 588

Query: 244 KPLHPYTQALLSATPAIHPDPLKPKIRIVGELPNPLNPPDGCAFHKRCPYATERCAKEVP 303
            P HPYT AL+++  +I P    P   + G+ PNP+N P GC FH RCP A ++C ++ P
Sbjct: 589 DPKHPYTHALMNSALSISPGESVPDPGLSGDFPNPMNRPSGCPFHPRCPLADQQCREQAP 648

Query: 304 ALRQVSTRQVAC 315
               +    V C
Sbjct: 649 GPELIDNTLVQC 660



 Score =  201 bits (510), Expect = 6e-56
 Identities = 114/299 (38%), Positives = 167/299 (55%), Gaps = 9/299 (3%)

Query: 27  VRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLIEEPSS----GSLQIAGTEVKGAS 82
           + A+ G+S EL  G+TL +VGESG GKS  A AL  +  P++      +   G+++  A+
Sbjct: 23  LHAVRGISLELNRGETLGIVGESGSGKSMTALALMNLLPPAAKRQASCIDFDGSDLTHAT 82

Query: 83  KAERKQLRRD--VQMVFQSPYASLNPRQKIGDQLAEPLLINTSLSKAERRDKVQKMMEQV 140
           + E     R   + M+FQ P  SLNP   IG QL E + ++  +S  E  ++   ++E+V
Sbjct: 83  ERELASKIRGQRIGMIFQEPMTSLNPVYSIGRQLKETMTLHRKVSDTEAENRAVYLLEKV 142

Query: 141 GLRP--EHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSALDVSIQAQVLNLFMD 198
           GL       ++YPH  SGGQRQR+ +A A+M +P++L+ADEPT+ALDV+IQAQ+L+L  +
Sbjct: 143 GLPDPASRLKQYPHELSGGQRQRVMIAMALMNEPELLIADEPTTALDVTIQAQILHLLRE 202

Query: 199 LQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIYAKPLHPYTQALLSATP 258
           LQ+EF  + + I+H+L VV   AD + VMY G   E G   ++   P HPYT+ LL   P
Sbjct: 203 LQQEFGMSMILITHDLGVVSRAADNIAVMYAGDIVETGKTGEVLENPRHPYTKGLLECVP 262

Query: 259 AIHPDPLKPKIRIVGELPNPLNPPDGCAFHKRCPYATERCAKEVPALRQV-STRQVACH 316
                  +    I G +P       GCAF  RCP A   C    P  +++   R   CH
Sbjct: 263 GYKGQSQQRLGAIPGIVPAMTGDISGCAFASRCPRAAGVCRTTNPPTKKLHQGRYFVCH 321