Pairwise Alignments

Query, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 365 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  420 bits (1079), Expect = e-122
 Identities = 196/352 (55%), Positives = 267/352 (75%), Gaps = 2/352 (0%)

Query: 7   APLMLAASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGKLMTGN 66
           A L LA SV  AA TV IYNWS Y+   TL +F++A+GI P YDV+DSNETL+GKL+ G 
Sbjct: 15  AGLTLAVSV-QAASTVHIYNWSDYIGETTLADFEKATGIKPVYDVFDSNETLEGKLLAGR 73

Query: 67  SGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGFPYLWG 126
           +GYDVV PSNHF+ +QI+  A ++LDK++LPN+ NL+PVLLK LE NDPGNQY  PYLWG
Sbjct: 74  TGYDVVVPSNHFLGKQIKAGAFQKLDKAQLPNYANLDPVLLKRLEKNDPGNQYAVPYLWG 133

Query: 127 STGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIALHYLGL 186
           + GIGYN++K+KAVLG +  +DSW ++F+PE + KL +CGV+ LD+G E++P  L+YLGL
Sbjct: 134 TNGIGYNVEKIKAVLGVDK-IDSWAMLFEPENIKKLSNCGVSFLDSGDEMIPAMLNYLGL 192

Query: 187 PHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAKNRADE 246
             +S+DP+DY+KA+  L+K+RPY++YF+SSKY  DLANG+ICV  GFSGD+ QA+ RA E
Sbjct: 193 NPNSEDPEDYKKAEAQLLKIRPYVTYFNSSKYISDLANGEICVAAGFSGDIFQARERASE 252

Query: 247 ANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNHVQYANG 306
           A  GV++ Y IPKEG  +WFDM+A+P DA + K  +A++NY+L+PEV+A +S+ V YAN 
Sbjct: 253 AGKGVEIAYVIPKEGGNLWFDMLAIPRDATNVKQAHAFINYVLKPEVIAQVSDTVGYANP 312

Query: 307 NLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKAG 358
           N KA  L+D  ++ +  +YP   V+ KLY    +P KI R+ TR WT +K+G
Sbjct: 313 NPKAGELMDQKVRTDEAVYPPQAVVDKLYVNSELPPKIQRLMTRSWTKVKSG 364