Pairwise Alignments

Query, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 387 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  126 bits (317), Expect = 8e-34
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 27/319 (8%)

Query: 22  VKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGKLMTGNSGYDVVFPSNHFMAR 81
           + I  W +Y  P T + F  A+G+    +V+ SNE +  KL  G  G+D+  P+N+ ++ 
Sbjct: 67  MSIATWPNYHDPATFEAFTAATGVAVEVNVFGSNEEMLAKLQAGGIGWDLFVPTNYTIST 126

Query: 82  QIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGFPYLWGSTGIGYNIDKVKAVL 141
            ++   +  LD SKLPN+           E    G  Y  P  WG+TGI  N DK+K   
Sbjct: 127 YVKLGLIDELDLSKLPNYDASTENARFTNEGIVEGKTYAVPKNWGTTGIAVNSDKIK--- 183

Query: 142 GDNAPVDSWDLIFKPEYMSKLKSCGVAVL-DNGPELLPIALHYLGLPHHSQDPKDYEKAK 200
              APV SW   F+   ++  ++ G A++ D     +  AL  LG   +S  P++  KA+
Sbjct: 184 ---APVASWKDFFE---IAMTEADGRAMVHDYQLTTIGNALVSLGFSFNSIKPEELAKAE 237

Query: 201 DLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAKNRADEANNGVKVGYSIPKE 260
           +LL+KV+P++ Y  +S Y   +   D  + + ++ D  Q      E      + + + K+
Sbjct: 238 ELLIKVKPHL-YAINSDYQPSMRATDAWMTMCWTNDGAQLNRDMPE------IKFVLGKD 290

Query: 261 GAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMAN-ISNHVQYANGNLKADG----LVD 315
           G  +W D  A+P  A ++ AGYA ++YL+ P   AN +  H+  ANG    D     L+ 
Sbjct: 291 GGEIWSDFYAIPKSAANKPAGYALLDYLMTP---ANAVKEHI--ANGAPTTDSRVMKLLP 345

Query: 316 PAMKGNTMIYPSDEVMGKL 334
             +  N ++YP +  +  L
Sbjct: 346 ADVTSNKIVYPDEAALTPL 364