Pairwise Alignments

Query, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 361 a.a., putrescine-binding periplasmic protein PotF from Phaeobacter inhibens DSM 17395

 Score =  353 bits (906), Expect = e-102
 Identities = 170/358 (47%), Positives = 241/358 (67%)

Query: 1   MRTFLLAPLMLAASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDG 60
           ++T  L  ++  +S A+ AE V++YNWS Y+  D L+ F+  +GI   YDV+DSNE L+ 
Sbjct: 3   LKTMTLTAIVALSSAAAVAEEVRVYNWSDYIDEDLLEKFETETGIDLIYDVFDSNELLET 62

Query: 61  KLMTGNSGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYG 120
           K++ G SGYDVV P+  F+ARQIQ  A ++LD SKL N  N+  V+       DP N Y 
Sbjct: 63  KMLAGGSGYDVVVPTGSFLARQIQAGAFQKLDTSKLSNAGNMWDVIEDRTARYDPDNLYS 122

Query: 121 FPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIA 180
             Y+WG+TGIG N  KV+  LG +AP+DS +L+F P+ + KL +CGV  LD   E++P A
Sbjct: 123 VNYMWGTTGIGANTAKVEEALGADAPIDSLELVFNPDNIEKLANCGVYFLDAPDEMIPAA 182

Query: 181 LHYLGLPHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQA 240
           L Y+G   +S DP    KA+ +LM +RPY+  FHSS+Y   LANGDICV  G+SGD+LQA
Sbjct: 183 LKYIGEDPNSMDPDVVAKAEPVLMAIRPYVKKFHSSEYINALANGDICVAFGWSGDILQA 242

Query: 241 KNRADEANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNH 300
           ++RADEA+NGV++ ++ PKEGA MWFD +A+PVDAP+    + ++N++++ E MA  SN+
Sbjct: 243 RDRADEADNGVEIVFNAPKEGALMWFDQMAIPVDAPNPDGAHKFLNFIMEAENMAAASNY 302

Query: 301 VQYANGNLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKAG 358
           V YANGN  +   ++  + G+  IYPS+E +  LY  EA P K+ R  TR+WT IK+G
Sbjct: 303 VYYANGNKASQEFLEEDVIGDPAIYPSEETLKNLYIKEAYPPKVQRKATRMWTKIKSG 360