Pairwise Alignments

Query, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Klebsiella michiganensis M5al

 Score =  183 bits (465), Expect = 5e-51
 Identities = 105/324 (32%), Positives = 176/324 (54%), Gaps = 19/324 (5%)

Query: 11  LAASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGKLMTGNSG-Y 69
           ++A+ A  ++T+  YNW+ YV P  L+ F + +GI   Y  Y+SNET+  KL T   G Y
Sbjct: 18  MSAAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAY 77

Query: 70  DVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGFPYLWGSTG 129
           D+V PS +F+ +  +   L+++DKSKL N+ NL+P +L   +  DP N Y  PY+WG+T 
Sbjct: 78  DLVVPSTYFVDKMRKEGMLQKIDKSKLSNFGNLDPEMLN--KPFDPNNDYSIPYIWGATA 135

Query: 130 IGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIALHYLGLPHH 189
           IG N D++     D   V SW  ++KPEY S L      + D+  E+  +AL  LG   +
Sbjct: 136 IGINSDEI-----DPKTVTSWADLWKPEYKSSL-----LLTDDAREVFQVALRKLGYSGN 185

Query: 190 SQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAKNRADEANN 249
           + DPK+ E A + L K+ P ++ F+S         G++ + + ++G    A+    +A  
Sbjct: 186 TTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSAWVAR----QAGT 241

Query: 250 GVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNHVQYANGNLK 309
            ++V +  PKEG   W D +++P +A +       +N+LL+PE+   ++  + Y   NL 
Sbjct: 242 PLEVVW--PKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPEIAKQVAETIGYPTPNLA 299

Query: 310 ADGLVDPAMKGNTMIYPSDEVMGK 333
           A  ++ P +  +  +YP    + K
Sbjct: 300 ARKMLSPEVANDKSLYPDAATIQK 323