Pairwise Alignments

Query, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 370 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Klebsiella michiganensis M5al

 Score =  401 bits (1031), Expect = e-116
 Identities = 191/348 (54%), Positives = 251/348 (72%), Gaps = 1/348 (0%)

Query: 12  AASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGKLMTGNSGYDV 71
           A S+A+  +T+ +YNWS Y+APDT+ NF++ +GI   YDV+DSNE L+GKLM G++G+D+
Sbjct: 22  AGSLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDL 81

Query: 72  VFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGFPYLWGSTGIG 131
           V PS  F+ RQ+     + LDKSKLPNW NL+P +LK +  +DP N+Y  PYLW +TGIG
Sbjct: 82  VVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKHDPDNKYAIPYLWATTGIG 141

Query: 132 YNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIALHYLGLPHHSQ 191
           YNIDKVKAVLG +AP+DSWDL+ KPE + KLKSCGV+ LD   E+    L+YLG   +S 
Sbjct: 142 YNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSS 201

Query: 192 DPKDYE-KAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAKNRADEANNG 250
              DY   A DLL+K+RP I YFHSS+Y  DLANGDICV +G++GDV QA NRA EA NG
Sbjct: 202 KADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNG 261

Query: 251 VKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNHVQYANGNLKA 310
           V V Y IPKEGA  +FD+ AMP DA ++   Y ++NYL++P+V+A+IS+HV YANGN  +
Sbjct: 262 VNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAHISDHVYYANGNKAS 321

Query: 311 DGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKAG 358
             LV   ++ N  IYP  +V  KL+ L+    KIDR+RTR WT +K+G
Sbjct: 322 LPLVSEEIRNNPAIYPPADVFAKLFTLKVQDPKIDRVRTRAWTKVKSG 369