Pairwise Alignments

Query, 527 a.a., Peptide chain release factor 3 from Pseudomonas putida KT2440

Subject, 556 a.a., peptide chain release factor 3 from Synechococcus elongatus PCC 7942

 Score =  442 bits (1138), Expect = e-128
 Identities = 242/521 (46%), Positives = 334/521 (64%), Gaps = 10/521 (1%)

Query: 8   VAKRRTFAIISHPDAGKTTITEKLLLMGKAIAVAGTVKSRKSDRHATSDWMEMEKQRGIS 67
           V +RR FAIISHPDAGKTT+TEKLLL G AI  AG VK+++S R ATSDWME+EKQRGIS
Sbjct: 27  VQQRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVKAKRSQRAATSDWMELEKQRGIS 86

Query: 68  ITTSVMQFPYREHMINLLDTPGHEDFSEDTYRTLTAVDSALMVLDGGKGVEPRTIALMDV 127
           IT++V+QF Y +  INLLDTPGH+DFSEDTYRTL A D+A+M+ D  KG+EP+T  L +V
Sbjct: 87  ITSTVLQFNYHDCTINLLDTPGHQDFSEDTYRTLAAADNAVMLEDAAKGLEPQTRKLFEV 146

Query: 128 CRLRDTPIVSFINKLDRDIRDPIELLDEIEAVLKIKAAPITWPIGCYRDFKGVYHLTGDY 187
           CR+R+ PI +F NK+DR  R+P+ELLDEIE  L ++   + WPIG    F+GV+      
Sbjct: 147 CRMRNIPIFTFFNKMDRPGREPLELLDEIEQELGLQTYAVNWPIGSGDRFRGVFDRRKQQ 206

Query: 188 IVVYTPG-HGHERTEAKIIQKLDSDEARAHLGDQYDSFVEQLELVQGACHEFNQEEFING 246
           + ++    HG  + +   ++  D   A     D      ++LEL++G   EF+ E    G
Sbjct: 207 VHLFERSVHGKRQAKDTTLEWGDPQLADLIEPDLLQQLQDELELLEGVGTEFDLEAIHAG 266

Query: 247 QLTPVFFGTALGNFGVDHVLDAVVDWAPRPLGRVAHERTVEPVEEKFTGFVFKIQANMDP 306
           QLTPVF+G+A+ NFGV+  L+A +D+A +P  R +    + P   +F+GFVFK+QANMDP
Sbjct: 267 QLTPVFWGSAMTNFGVELFLEAFLDYALKPGARRSSVGDMAPDYPEFSGFVFKLQANMDP 326

Query: 307 KHRDRIAFMRICSGKYEKGMKMRHVRLNKDLRIGDALTFFSSEREQLEEAFAGDIIGLHN 366
           +HRDRIAF+R+C+GK+EK M ++H R  + LR+      F  +RE L++A+ GD+IGL+N
Sbjct: 327 RHRDRIAFVRVCTGKFEKDMTVQHARSGRTLRLSRPQKLFGQDREVLDDAYPGDVIGLNN 386

Query: 367 HGTIQIGDTFTEGEALGFTGIPHFAPELFRRVRLKDPLKSKQLRQGLQQLAEEGATQVFF 426
            G   IGDT   G+ L + GIP F+PE+F  +R  +P K K  R+G+ +L EEGA Q+ +
Sbjct: 387 PGMFAIGDTIYTGKRLEYDGIPCFSPEIFAYLRNPNPSKFKPFRKGVSELREEGAVQIMY 446

Query: 427 PERS--NDIILGAVGVLQFDVVASRLKEEYKVECAYEPITVWSARWI--SCDDKKKLEE- 481
              S   D IL AVG LQ +VV  RL+ EY VE   EP+    ARW+    D  +K+   
Sbjct: 447 SADSAKRDPILAAVGQLQLEVVQYRLENEYGVETLLEPLPFSVARWVEGGWDVLEKVGRL 506

Query: 482 FQTKAMENLAIDGGGHLTYLAPTRVNLALMEERWPDIKFRA 522
           F T  ++    D  G    L     NL  +E   P+++ R+
Sbjct: 507 FNTTTVK----DTWGRPVLLFKNEWNLRQIEADHPELQLRS 543