Pairwise Alignments

Query, 527 a.a., Peptide chain release factor 3 from Pseudomonas putida KT2440

Subject, 284 a.a., hypothetical peptide chain release factor 3 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  378 bits (970), Expect = e-109
 Identities = 182/275 (66%), Positives = 220/275 (80%)

Query: 1   MTNQAAEVAKRRTFAIISHPDAGKTTITEKLLLMGKAIAVAGTVKSRKSDRHATSDWMEM 60
           M++   EV KRRTFAIISHPDAGKTTITEK+LL G A+  AGTVK +KS +HA SDWMEM
Sbjct: 1   MSDNKVEVDKRRTFAIISHPDAGKTTITEKVLLFGNALQKAGTVKGKKSGQHAKSDWMEM 60

Query: 61  EKQRGISITTSVMQFPYREHMINLLDTPGHEDFSEDTYRTLTAVDSALMVLDGGKGVEPR 120
           EK RGISITTSVMQFPY   ++NLLDTPGHEDFSEDTYRTLTAVDS LMV+D  KGVE R
Sbjct: 61  EKDRGISITTSVMQFPYGGALVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDSAKGVEDR 120

Query: 121 TIALMDVCRLRDTPIVSFINKLDRDIRDPIELLDEIEAVLKIKAAPITWPIGCYRDFKGV 180
           TI LM+V RLRDTPIV+F+NKLDRDIRDPIEL+DE+E VL I  APITWPIG  ++FKGV
Sbjct: 121 TIKLMEVTRLRDTPIVTFMNKLDRDIRDPIELMDEVENVLNIACAPITWPIGSGKEFKGV 180

Query: 181 YHLTGDYIVVYTPGHGHERTEAKIIQKLDSDEARAHLGDQYDSFVEQLELVQGACHEFNQ 240
           YH+  D +V+Y  G GH   E ++I+ +D+ E    +G       +++ELV+GA +EF+ 
Sbjct: 181 YHILRDEVVLYQSGMGHTIQERRVIEGIDNPELDKAIGSYAADLRDEMELVRGASNEFDH 240

Query: 241 EEFINGQLTPVFFGTALGNFGVDHVLDAVVDWAPR 275
           + F+ G+LTPVFFGTALGNFGVDH+LD +V+WAP+
Sbjct: 241 QAFLKGELTPVFFGTALGNFGVDHILDGIVEWAPK 275