Pairwise Alignments

Query, 527 a.a., Peptide chain release factor 3 from Pseudomonas putida KT2440

Subject, 697 a.a., translation elongation factor G (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  166 bits (421), Expect = 2e-45
 Identities = 140/480 (29%), Positives = 221/480 (46%), Gaps = 42/480 (8%)

Query: 7   EVAKRRTFAIISHPDAGKTTITEKLLLMGKAIAVAGTVKSRKSDRHATSDWMEMEKQRGI 66
           E++K R   I +H DAGKTT TE++L +   I   G V     D  +T+D+M  E +RGI
Sbjct: 3   ELSKYRNIGIFAHVDAGKTTTTERILKLTGKIHKIGEVH----DGESTTDFMVQEAERGI 58

Query: 67  SITTSVMQFPYREHMINLLDTPGHEDFSEDTYRTLTAVDSALMVLDGGKGVEPRTIALMD 126
           +I ++ +   +++H  N++DTPGH DF+ + YR+L  +D  + V  G  GVEP++     
Sbjct: 59  TIQSAAVSCFWKDHRFNVIDTPGHVDFTVEVYRSLKVLDGGIAVFCGSGGVEPQSETNWR 118

Query: 127 VCRLRDTPIVSFINKLDRDIRDPIELLDEIEAVLKIKAAPITWPIGCYRDFKGVYHLTGD 186
                +   + F+NKLDR   D + ++ + + VL      +  PIG   +F GV  L   
Sbjct: 119 YANESEVARIIFVNKLDRMGADFLRVVKQTKDVLAANPLVMVLPIGIEDEFCGVVDLLTR 178

Query: 187 YIVVYTPGHGHERTEAKIIQKLDSDEARAHLGDQYDSFVEQLELVQGACHEFNQEEFIN- 245
              V+      E  E K +     D    +     ++ VEQ + +  A  E  +    + 
Sbjct: 179 KAYVWDDSGIPENFEVKDVPANMVDLVEEYREMLIETAVEQDDDLLEAYMEGEEPSIEDL 238

Query: 246 ------GQLT----PVFFGTALGNFGVDHVLDAVVDWAPRP-----------LGRVAHER 284
                 G  T    P F G+A  N G+  VLDAVVD+ P P            G    E 
Sbjct: 239 KRCIRKGTRTMAFFPTFCGSAFKNKGMQLVLDAVVDYLPAPDEVDPQPLTDEEGNETGEY 298

Query: 285 TVEPVEEKFTGFVFKIQANMDPKHRDRIAFMRICSGKYEKGMKMRHVRLNKDLRIGDALT 344
            +   +E      FKI   MD +    + F+RI +G+ +KG  + +    K  RIG    
Sbjct: 299 AIVSADESLKALAFKI---MDDRF-GALTFVRIYAGRLKKGDTILNSATGKTERIGRMCE 354

Query: 345 FFSSEREQLEEAFAGDIIGLHNHGTIQIGDTFTEG------EALGFTGIPHFAPELFRRV 398
            ++++R ++E A AGDII +     +Q G T  +       EA+ F       P +   V
Sbjct: 355 MYANDRIEIESAEAGDIIAIVGMKNVQTGHTLCDVKHPCTLEAMVFP-----EPVISIAV 409

Query: 399 RLKDPLKSKQLRQGL-QQLAEEGATQVFFPERSNDIILGAVGVLQFDVVASRLKEEYKVE 457
             KD   S+++   + + +AE+ + +V   E S + IL  +G L  D+    LK  Y VE
Sbjct: 410 APKDKGGSEKMAIAIGKMIAEDPSFRVETDEDSGETILKGMGELHLDIKVDILKRTYGVE 469