Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 295 a.a., permease from Sinorhizobium meliloti 1021

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 22/233 (9%)

Query: 22  WAAVLVILALLV-----HW------IGIDTIARYRDDLGFYLQAHLVLVLASMAAALAVG 70
           W  +L+++A++      +W      IG   +  Y D     ++  + ++      ++A+G
Sbjct: 60  WPIILILIAVIAWFASRNWKIVAGAIGTLLLIGYLDMWDDTMKT-ISMIFVCTVLSIAIG 118

Query: 71  IPAGIALSRPHRVDKAERFMQFFN----VGNTIPPLAVLAIALSILGIGAGPAIFALFLA 126
           IP GI +SR      ++RF    N    V  T+P    L   + +LGIG  P + A+ + 
Sbjct: 119 IPMGIIMSR------SDRFQNIVNPVLDVMQTMPSFVYLIPVVMLLGIGKVPGLIAVVIY 172

Query: 127 SLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALALNVG 186
           ++ P++R T  G++ V   + EAA   G +  Q+L  V++P A+P I+ G+   + + + 
Sbjct: 173 AIPPMIRLTNLGIRLVDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAGINQTIMMALA 232

Query: 187 TAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLDAAVSFSSRR 239
              +A +IG   LG  +   IA       +        +A++ D       RR
Sbjct: 233 MVVIASMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRVSQAYGRR 285