Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  139 bits (351), Expect = 7e-38
 Identities = 97/249 (38%), Positives = 132/249 (53%), Gaps = 32/249 (12%)

Query: 16  GKGLLGWAAVLVILALLV---HWIGIDTIARY--RDDLGFYLQA--HLVLVLASMAAALA 68
           G  LL +A VLV+   ++    W  +  +  Y  R DL F+ +A  H+ L L S+AAA  
Sbjct: 145 GLRLLVFAGVLVLAGGMLVTGRWDDLSIVKEYANRADL-FWTEAGRHVTLALGSLAAATI 203

Query: 69  VGIPAGIALSRPHRVDKAER-FMQFFNVGNTIPPLAVLAI----------------ALSI 111
           VG+P GI     HRV++     +   N   TIP +A+  I                A+ I
Sbjct: 204 VGLPLGILC---HRVERLRAGVLNVLNAIQTIPSIALFGILIAPLGWIAANVPGAAAIGI 260

Query: 112 LGIGAGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVP 171
            GIGA PA  ALFL SLLP+V NT  GL  VP +  +AA GIGMT RQ+L  +E P A P
Sbjct: 261 RGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIGMTDRQRLVAIEFPLAFP 320

Query: 172 IIVGGVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALL----AL 227
           +I+ G+R+ L  N+G A +A LIG    G  +F G+       +LLGA  T +L    A+
Sbjct: 321 VILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDLVLLGAIPTVVLAFTAAI 380

Query: 228 VLDAAVSFS 236
           VLDA +  +
Sbjct: 381 VLDALIEMT 389