Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 392 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  123 bits (308), Expect = 6e-33
 Identities = 89/247 (36%), Positives = 127/247 (51%), Gaps = 30/247 (12%)

Query: 19  LLGWAAVLVILALLV---HWIGIDTIARYRDDL-GFYLQA--HLVLVLASMAAALAVGIP 72
           LL   A+   L LL+    W G+  +  Y +    F+ +A  HL L L ++A A AVG+P
Sbjct: 137 LLALGALFGALGLLLASGQWDGVSVLKEYANRADAFWREARTHLALALGAVAVACAVGLP 196

Query: 73  AGIALSRPHRVDKAERF-MQFFNVGNTIPPLAVLAI----------------ALSILGIG 115
            G+     HRV       +Q   +  TIP +A+  I                AL + GIG
Sbjct: 197 LGVLC---HRVAWLRGMVLQGLTIIQTIPSIALFGILMAPLGWLAAHVPAIAALGVRGIG 253

Query: 116 AGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVG 175
           A PA+ AL L +LLP+V NT  GL  VPA+  +AA G+GM   + L +VELP A+P+I+ 
Sbjct: 254 ATPALVALILYALLPVVANTVVGLAQVPAATVDAARGMGMGRGRLLREVELPLALPVILT 313

Query: 176 GVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALL----ALVLDA 231
           GVR+ L   +G   +A LIG    G+ +F G+       +LLGA  T  L    A++LDA
Sbjct: 314 GVRIVLVQAIGLTTVAALIGGGGFGTFVFQGVGQAAMDLVLLGALPTVALAFGAAVILDA 373

Query: 232 AVSFSSR 238
            +  + R
Sbjct: 374 LIEGARR 380