Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

 Score = 84.3 bits (207), Expect = 2e-21
 Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 2/175 (1%)

Query: 56  LVLVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIG 115
           L L++ S   AL +GIP GI  +R   V      M   +V  T+P LA L  A+   GIG
Sbjct: 94  LSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPM--LDVMQTLPSLAYLIPAVLFFGIG 151

Query: 116 AGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVG 175
             P + A  + ++ P ++ T  G++ V   L E     G T  Q L ++ELP AVP I+ 
Sbjct: 152 EVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVPSIMM 211

Query: 176 GVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLD 230
           GV  A+ L+     +A  IG+  LG +I  GI   +    L        LA++ D
Sbjct: 212 GVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAVIFD 266