Pairwise Alignments

Query, 313 a.a., putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 305 a.a., choline uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  132 bits (332), Expect = 1e-35
 Identities = 93/295 (31%), Positives = 153/295 (51%), Gaps = 12/295 (4%)

Query: 18  LLGAALLFAGFAQAAEKPLIRIGARVFTEQTVLAEITAQYLRANGFDVRVIGGLGSS-LA 76
           L+GAA+  A    AAE  ++ + +++ TE  VL  I    L AN         LG++ + 
Sbjct: 9   LIGAAIALALTTAAAEADVV-VSSKIDTEGGVLGNIILSVLNANDIKTTDRVQLGATPVV 67

Query: 77  RQAQETGQLDLMWEYTGVSLVSYNHIDE-RMPSAEATYAKVKELDAKKD-LIWLTPSKFS 134
           R+A   G++D+  EYTG +   +   D+     A   Y + K+LD   + ++WLTPS  +
Sbjct: 68  RKAIIAGEIDIYPEYTGNAAFFFEKADDPAWKDAAKAYDEAKKLDYDANKIVWLTPSPAN 127

Query: 135 NTYALGLPKQVAEAYPQINSISDLNQVLRDERKRNHLVALDTEFANRPDGLVGLKEMYDL 194
           NT+A+ L K +AE    + ++SD  + +    +   ++A  +EF N    L   +  Y  
Sbjct: 128 NTWAIALRKDIAEKN-NLKTLSDFGKFVSGGGEV--VLAASSEFVNSAAALPAFQTTYSF 184

Query: 195 QVGRANIRQMDAG-----LVYTAMHNNQVFAGLVYTTDGRLSAFNLKLLEDDKHYFPDYT 249
           ++    +  +  G     +   A   N   A +VY TDG ++   L +LEDDK   P Y 
Sbjct: 185 KLKPEQLITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKAVQPVYQ 244

Query: 250 AAPVVRKAVLDANPQLVALLKPLAEQLDDETMRQLNAKVDVDHQNPTAVAAAFLR 304
            AP++R+AVL  NP +  +LKP+ E+LD  T+++LN +V V  ++  AVA  FL+
Sbjct: 245 PAPIIREAVLKENPAIEEILKPVFEKLDLTTLQELNGRVQVGGESAKAVAEDFLK 299