Pairwise Alignments

Query, 313 a.a., putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 518 a.a., glycine betaine ABC transporter substrate-binding protein from Ralstonia sp. UNC404CL21Col

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 84/296 (28%), Positives = 129/296 (43%), Gaps = 18/296 (6%)

Query: 13  KRIALLLGAALLFAGFAQAAEKPLIRIGARVFTEQTVLAEITAQYLRANGFDVRVIGGLG 72
           +R+   L    L    +  AE+PL RIG++ FTE  VL EI  Q     G    V G   
Sbjct: 13  RRLLAWLALGWLACSASAFAEQPL-RIGSKRFTESYVLGEILTQTANPRGPAEHVPGLGN 71

Query: 73  SSLARQAQETGQLDLMWEYTGVSLVSYNHIDERM---PSAEATYAKVKELDAKKDLIWLT 129
           +++   A + G +D+  +Y G       H+       P   A    V    A   L    
Sbjct: 72  TAIVFAALKNGSIDVYPDYLGTIAAEILHLPAEQAANPDQAALLVDVNRGLAPMGLAAGV 131

Query: 130 PSKFSNTYALGLPKQVAEAYPQINSISDL--NQVLRDERKRNHLVALDTEFANRPDGLVG 187
           P  F +TYAL +    AE    I +++DL  +  LR        + L  EF  R DG   
Sbjct: 132 PLGFEDTYALAMRDADAER-EHIRTLADLATHPTLR--------LGLSHEFLGRADGWPA 182

Query: 188 LKEMYDLQVGRANIRQMDAGLVYTAMHNNQVFAGLVYTTDGRLSAFNLKLLEDDKHYFPD 247
           + + Y L      +   D G+ Y A+  NQV    +Y+TD ++   +L++L+D  H FP 
Sbjct: 183 IAQHYKLPQRPTGL---DHGVAYDALRANQVDVIDIYSTDAKIGREHLRVLDDPAHVFPR 239

Query: 248 YTAAPVVRKAVLDANPQLVALLKPLAEQLDDETMRQLNAKVDVDHQNPTAVAAAFL 303
           Y A  + R  V    P     +  LA ++  + M  +NA V+++ Q+ +  A  FL
Sbjct: 240 YDAVLLYRADVAQRYPAQWQAINTLAGRIQRDDMVAMNAAVELEGQSFSQAARQFL 295